RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SHCBP1Q8NEM2 672 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 SH3TC2Q8TF17 1288 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 CHURC1Q8WUH1 139 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 BRCA2P51587 3418 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 STAT3P40763 770 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 STAT2P52630 851 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 ZNF543Q08ER8 600 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 PLS1Q14651 629 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 FAM160B2Q86V87 743 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 RAET1EQ8TD07 263 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 ZNF333Q96JL9 665 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 PRR12Q9ULL5 1215 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 ZNF536O15090 1300 aa17.98■□□□□ 0.47
TRIM47-206ENST00000592942 ADCY3O60266 1144 aa17.97■□□□□ 0.47
TRIM47-206ENST00000592942 GRK4P32298 578 aa17.97■□□□□ 0.47
TRIM47-206ENST00000592942 SLC16A2P36021 539 aa17.97■□□□□ 0.47
TRIM47-206ENST00000592942 RALYLQ86SE5 291 aaKnown RBP17.97■□□□□ 0.47
TRIM47-206ENST00000592942 PXYLP1Q8TE99 480 aa17.97■□□□□ 0.47
TRIM47-206ENST00000592942 NUDT12Q9BQG2 462 aa17.97■□□□□ 0.47
TRIM47-206ENST00000592942 UBAC1Q9BSL1 405 aa17.97■□□□□ 0.47
TRIM47-206ENST00000592942 RAVER2Q9HCJ3 691 aaKnown RBP17.97■□□□□ 0.47
TRIM47-206ENST00000592942 GPCPD1Q9NPB8 672 aa17.97■□□□□ 0.47
TRIM47-206ENST00000592942 GPHNQ9NQX3 736 aaPredicted RBP17.97■□□□□ 0.47
TRIM47-206ENST00000592942 FRMPD2Q68DX3 1309 aaPredicted RBP17.97■□□□□ 0.47
TRIM47-206ENST00000592942 SLC15A5A6NIM6 579 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 IFIT3O14879 490 aaKnown RBP17.96■□□□□ 0.47
TRIM47-206ENST00000592942 ZBED4O75132 1171 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 SLC25A27O95847 323 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 XRCC5P13010 732 aaKnown RBP17.96■□□□□ 0.47
TRIM47-206ENST00000592942 ELNP15502 786 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 CYP2B6P20813 491 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 HSPA4P34932 840 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 SNAP25P60880 206 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 GRB14Q14449 540 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 SLC9C1Q4G0N8 1177 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
TRIM47-206ENST00000592942 NCAPG2Q86XI2 1143 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
TRIM47-206ENST00000592942 MROH8Q9H579 483 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 KAT14Q9H8E8 782 aa17.96■□□□□ 0.47
TRIM47-206ENST00000592942 STRNO43815 780 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 IGHA2P01877 340 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 GOLGA8HP0CJ92 632 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 FDX1P10109 184 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 MAP2K5Q13163 448 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 CCDC96Q2M329 555 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 CPXCR1Q8N123 301 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 SOCS4Q8WXH5 440 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 USP26Q9BXU7 913 aa17.95■□□□□ 0.46
TRIM47-206ENST00000592942 PRC1O43663 620 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 COBLO75128 1261 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 HOXC6P09630 235 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 OAZ1P54368 228 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
TRIM47-206ENST00000592942 MTFR1Q15390 333 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 SYDE2Q5VT97 1194 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 WDR78Q5VTH9 848 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 RNF20Q5VTR2 975 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 SLAIN1Q8ND83 568 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 NPLOC4Q8TAT6 608 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 AGBL1Q96MI9 1066 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 MTA3Q9BTC8 594 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 RANBP17Q9H2T7 1088 aaKnown RBP17.94■□□□□ 0.46
TRIM47-206ENST00000592942 CPVLQ9H3G5 476 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 LY9Q9HBG7 655 aa17.94■□□□□ 0.46
TRIM47-206ENST00000592942 ISY1Q9ULR0 285 aaKnown RBP17.94■□□□□ 0.46
TRIM47-206ENST00000592942 SMCHD1A6NHR9 2005 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
TRIM47-206ENST00000592942 REC8O95072 547 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 MCM5P33992 734 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 TROAPQ12815 778 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 TRIM32Q13049 653 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 IKQ13123 557 aaPredicted RBP17.93■□□□□ 0.46
TRIM47-206ENST00000592942 WTAPQ15007 396 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 CCL14Q16627 93 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 TMEM67Q5HYA8 995 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 GPATCH4Q5T3I0 446 aaKnown RBP17.93■□□□□ 0.46
TRIM47-206ENST00000592942 SNRNP48Q6IEG0 339 aaKnown RBP17.93■□□□□ 0.46
TRIM47-206ENST00000592942 ABRAQ8N0Z2 381 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 TRIB2Q92519 343 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 UBA5Q9GZZ9 404 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 FLRT1Q9NZU1 646 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
TRIM47-206ENST00000592942 ZNFX1Q9P2E3 1918 aaKnown RBP17.92■□□□□ 0.46
TRIM47-206ENST00000592942 PALM3A6NDB9 673 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-206ENST00000592942 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-206ENST00000592942 ADORA2AP29274 412 aa17.92■□□□□ 0.46
TRIM47-206ENST00000592942 RGS2P41220 211 aa17.92■□□□□ 0.46
TRIM47-206ENST00000592942 SLC35G1Q2M3R5 365 aa17.92■□□□□ 0.46
TRIM47-206ENST00000592942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.46
TRIM47-206ENST00000592942 MAD2L2Q9UI95 211 aa17.92■□□□□ 0.46
TRIM47-206ENST00000592942 IVNS1ABPQ9Y6Y0 642 aa17.92■□□□□ 0.46
TRIM47-206ENST00000592942 POTEFA5A3E0 1075 aa17.91■□□□□ 0.46
TRIM47-206ENST00000592942 INHAP05111 366 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms