RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ACER1Q8TDN7 264 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 SH2D4AQ9H788 454 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 IL17RBQ9NRM6 502 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 PDRG1Q9NUG6 133 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 TCP11L1Q9NUJ3 509 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 CLIP2Q9UDT6 1046 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 STX8Q9UNK0 236 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 TTC28Q96AY4 2481 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 PFASO15067 1338 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 A0A0G2JLL6 359 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-219ENST00000592927 FOSL2P15408 326 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 USP14P54578 494 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 USP17L2Q6R6M4 530 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
DDX39A-219ENST00000592927 PRRT2Q7Z6L0 340 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-219ENST00000592927 SIAH1Q8IUQ4 282 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 ZKSCAN3Q9BRR0 538 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 KIAA1683Q9H0B3 1180 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 HMX1Q9NP08 348 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-219ENST00000592927 TMOD4Q9NZQ9 345 aa13.91□□□□□ -0.18
DDX39A-219ENST00000592927 ATAD5Q96QE3 1844 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 MYH8P13535 1937 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 A0A1W2PRG0 241 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 MCM5P33992 734 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 HMGCS2P54868 508 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 SART3Q15020 963 aaKnown RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 ZYXQ15942 572 aaKnown RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 CYB5R4Q7L1T6 521 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 FBXL16Q8N461 479 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 MKL1Q969V6 931 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 COA7Q96BR5 231 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 ZSCAN31Q96LW9 406 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 ZSCAN10Q96SZ4 725 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 LBHD1Q9BQE6 289 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-219ENST00000592927 OGDHLQ9ULD0 1010 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 TMX2Q9Y320 296 aa13.9□□□□□ -0.18
DDX39A-219ENST00000592927 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.19
DDX39A-219ENST00000592927 ERICH2A1L162 156 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
DDX39A-219ENST00000592927 PRC1O43663 620 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 AK2P54819 239 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 TRIM32Q13049 653 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 LRRC26Q2I0M4 334 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 DGKHQ86XP1 1220 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 TTYH1Q9H313 450 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-219ENST00000592927 GOPCQ9HD26 462 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 TNKSO95271 1327 aa13.89□□□□□ -0.19
DDX39A-219ENST00000592927 RAD21O60216 631 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 HMGCRP04035 888 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 HSP90AA1P07900 732 aaKnown RBP13.88□□□□□ -0.19
DDX39A-219ENST00000592927 TOP1P11387 765 aaKnown RBP13.88□□□□□ -0.19
DDX39A-219ENST00000592927 NOVP48745 357 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 EXOSC10Q01780 885 aaKnown RBP13.88□□□□□ -0.19
DDX39A-219ENST00000592927 TMEM67Q5HYA8 995 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
DDX39A-219ENST00000592927 PROCA1Q8NCQ7 364 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-219ENST00000592927 LPAR1Q92633 364 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 VCPKMTQ9H867 229 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 SH2B1Q9NRF2 756 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-219ENST00000592927 EMILIN3Q9NT22 766 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
DDX39A-219ENST00000592927 F5H6K3 240 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 COL6A1P12109 1028 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 CPA1P15085 419 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 ANTXR2P58335 489 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 KLRC3Q07444 240 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 PABPC4Q13310 644 aaKnown RBP eCLIP13.87□□□□□ -0.19
DDX39A-219ENST00000592927 CUL4AQ13619 759 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 WTAPQ15007 396 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 IFIT1BQ5T764 474 aaKnown RBP13.87□□□□□ -0.19
DDX39A-219ENST00000592927 RCSD1Q6JBY9 416 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-219ENST00000592927 ANKS1AQ92625 1134 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 TMEM87BQ96K49 555 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 TMEM47Q9BQJ4 181 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 AGXT2Q9BYV1 514 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 AGTPBP1Q9UPW5 1226 aa13.87□□□□□ -0.19
DDX39A-219ENST00000592927 GREB1LQ9C091 1923 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-219ENST00000592927 PHIPQ8WWQ0 1821 aa13.86□□□□□ -0.19
DDX39A-219ENST00000592927 VCAM1P19320 739 aa13.86□□□□□ -0.19
DDX39A-219ENST00000592927 TREML2Q5T2D2 321 aa13.86□□□□□ -0.19
DDX39A-219ENST00000592927 SPICE1Q8N0Z3 855 aa13.86□□□□□ -0.19
DDX39A-219ENST00000592927 USP38Q8NB14 1042 aa13.86□□□□□ -0.19
DDX39A-219ENST00000592927 GMCL1P1Q8NEA9 526 aa13.86□□□□□ -0.19
DDX39A-219ENST00000592927 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
DDX39A-219ENST00000592927 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms