RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 PLA2G6O60733 806 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 ZBED4O75132 1171 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 GJB1P08034 283 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 CYP21A2P08686 494 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 HOXC6P09630 235 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 ZKSCAN1P17029 563 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-217ENST00000592391 COPB2P35606 906 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 CCDC178Q5BJE1 867 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 KIAA1211Q6ZU35 1233 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 KCTD1Q719H9 257 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 ABRAQ8N0Z2 381 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 CHURC1Q8WUH1 139 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 ZKSCAN3Q9BRR0 538 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 TEX13BQ9BXU2 312 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 SLC38A10Q9HBR0 1119 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 ZSWIM5Q9P217 1185 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
DDX39A-217ENST00000592391 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-217ENST00000592391 FDX1P10109 184 aa17.08■□□□□ 0.32
DDX39A-217ENST00000592391 ADORA2AP29274 412 aa17.08■□□□□ 0.32
DDX39A-217ENST00000592391 TRIM32Q13049 653 aa17.08■□□□□ 0.32
DDX39A-217ENST00000592391 IKQ13123 557 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-217ENST00000592391 CCL14Q16627 93 aa17.08■□□□□ 0.32
DDX39A-217ENST00000592391 RASGRP2Q7LDG7 609 aa17.08■□□□□ 0.32
DDX39A-217ENST00000592391 COL11A1P12107 1806 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-217ENST00000592391 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 FCER1AP12319 257 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 GJA8P48165 433 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 OAZ1P54368 228 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 TRDNQ13061 729 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 MAP3K21Q5TCX8 1036 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
DDX39A-217ENST00000592391 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 ANKS1AQ92625 1134 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-217ENST00000592391 LSG1Q9H089 658 aaKnown RBP17.07■□□□□ 0.32
DDX39A-217ENST00000592391 PAK6Q9NQU5 681 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-217ENST00000592391 PPP4R2Q9NY27 417 aa17.07■□□□□ 0.32
DDX39A-217ENST00000592391 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
DDX39A-217ENST00000592391 RPTORQ8N122 1335 aa17.06■□□□□ 0.32
DDX39A-217ENST00000592391 PDHBP11177 359 aa17.06■□□□□ 0.32
DDX39A-217ENST00000592391 ENAHQ8N8S7 591 aaPredicted RBP17.06■□□□□ 0.32
DDX39A-217ENST00000592391 NPLOC4Q8TAT6 608 aa17.06■□□□□ 0.32
DDX39A-217ENST00000592391 MMP19Q99542 508 aa17.06■□□□□ 0.32
DDX39A-217ENST00000592391 UBAC1Q9BSL1 405 aa17.06■□□□□ 0.32
DDX39A-217ENST00000592391 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.329e-7■■■□□ 19
DDX39A-217ENST00000592391 RAVER2Q9HCJ3 691 aaKnown RBP17.06■□□□□ 0.32
DDX39A-217ENST00000592391 HMX1Q9NP08 348 aaPredicted RBP17.06■□□□□ 0.32
DDX39A-217ENST00000592391 TNKSO95271 1327 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 E7EWF7 191 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 COBLO75128 1261 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 CDC45O75419 566 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 SNHG28P0DPA3 235 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
DDX39A-217ENST00000592391 KCTD2Q14681 263 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 MFSD14CQ5VZR4 134 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 BTNL9Q6UXG8 535 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 U2AF1L4Q8WU68 220 aaKnown RBP17.05■□□□□ 0.32
DDX39A-217ENST00000592391 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 SLC5A4Q9NY91 659 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 FLRT1Q9NZU1 646 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 PRR12Q9ULL5 1215 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 RIPK3Q9Y572 518 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
DDX39A-217ENST00000592391 FRMPD2Q68DX3 1309 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-217ENST00000592391 SGPL1O95470 568 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 CAPN2P17655 700 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 CACNB2Q08289 660 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-217ENST00000592391 ZNF543Q08ER8 600 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 OLFML2BQ68BL8 750 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 CYB5R4Q7L1T6 521 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
DDX39A-217ENST00000592391 PNMA1Q8ND90 353 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 DEFB118Q96PH6 123 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 KAT14Q9H8E8 782 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 GPCPD1Q9NPB8 672 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
DDX39A-217ENST00000592391 ZNF536O15090 1300 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 IGHA2P01877 340 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 SLC16A2P36021 539 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 SYDE2Q5VT97 1194 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 STOX1Q6ZVD7 989 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX39A-217ENST00000592391 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 FBXO40Q9UH90 709 aa17.03■□□□□ 0.32
DDX39A-217ENST00000592391 PGK2P07205 417 aa17.02■□□□□ 0.32
DDX39A-217ENST00000592391 SEC23AQ15436 765 aa17.02■□□□□ 0.32
DDX39A-217ENST00000592391 GPATCH4Q5T3I0 446 aaKnown RBP17.02■□□□□ 0.32
DDX39A-217ENST00000592391 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
DDX39A-217ENST00000592391 MAML3Q96JK9 1138 aa17.02■□□□□ 0.32
DDX39A-217ENST00000592391 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.32
DDX39A-217ENST00000592391 RANBP17Q9H2T7 1088 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms