RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 MAST2Q6P0Q8 1798 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 SOX1O00570 391 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-226ENST00000591534 PEX10O60683 326 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 CCND3P30281 292 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-226ENST00000591534 GRB14Q14449 540 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 CCL14Q16627 93 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 SHROOM1Q2M3G4 852 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-226ENST00000591534 TMEM179Q6ZVK1 233 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 KIF1BPQ96EK5 621 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 LRCH3Q96II8 777 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.37□□□□□ -0.59
BRCA1-226ENST00000591534 ARHGEF10LQ9HCE6 1279 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
BRCA1-226ENST00000591534 VPS9D1Q9Y2B5 631 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
BRCA1-226ENST00000591534 PFASO15067 1338 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 MYO5AQ9Y4I1 1855 aaKnown RBP11.36□□□□□ -0.59
BRCA1-226ENST00000591534 DNM1LO00429 736 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 DLL1O00548 723 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 CNMDO75829 334 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 PDE6AP16499 860 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 SHMT1P34896 483 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 PLCD1P51178 756 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 SEPT2Q15019 361 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 RPAP2Q8IXW5 612 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-226ENST00000591534 SHCBP1Q8NEM2 672 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 RHPN1Q8TCX5 695 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 ACER1Q8TDN7 264 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 RIOK1Q9BRS2 568 aaKnown RBP11.36□□□□□ -0.59
BRCA1-226ENST00000591534 SENP6Q9GZR1 1112 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-226ENST00000591534 MROH8Q9H579 483 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
BRCA1-226ENST00000591534 KBTBD13C9JR72 458 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 RAB11FIP3O75154 756 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 LRRC26Q2I0M4 334 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 C20orf194Q5TEA3 1177 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 OLFML2BQ68BL8 750 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 ABRAQ8N0Z2 381 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
BRCA1-226ENST00000591534 SLC4A5Q9BY07 1137 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 SPATC1LQ9H0A9 340 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 IL1RAPL2Q9NP60 686 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 ATP8A2Q9NTI2 1148 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 BTBD7Q9P203 1132 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 STXBP5LQ9Y2K9 1186 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 PCDHB15Q9Y5E8 787 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 ZNF532Q9HCE3 1301 aa11.35□□□□□ -0.59
BRCA1-226ENST00000591534 GOLIM4O00461 696 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 SLC25A27O95847 323 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 ADORA2AP29274 412 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 GABPAQ06546 454 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 PLS1Q14651 629 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 ZSCAN25Q6NSZ9 544 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 MOV10L1Q9BXT6 1211 aaKnown RBP11.34□□□□□ -0.59
BRCA1-226ENST00000591534 DCP1AQ9NPI6 582 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-226ENST00000591534 RCAN3Q9UKA8 241 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
BRCA1-226ENST00000591534 SPTLC1O15269 473 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 SEPT4O43236 478 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 FLOT1O75955 427 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 FCER1AP12319 257 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 ERCC3P19447 782 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 CYP2C19P33261 490 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 COPB2P35606 906 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 RFC5P40937 340 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 ICA1Q05084 483 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 AAMPQ13685 434 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 NCAPG2Q86XI2 1143 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 NRBP1Q9UHY1 535 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 LAMA3Q16787 3333 aa11.33□□□□□ -0.6
BRCA1-226ENST00000591534 DOCK3Q8IZD9 2030 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 APBB1O00213 710 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
BRCA1-226ENST00000591534 KDM4AO75164 1064 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 CYBAP13498 195 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 GUCY1A2P33402 732 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 GCGRP47871 477 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 MCM6Q14566 821 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 QPCTQ16769 361 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 FAM109BQ6ICB4 259 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-226ENST00000591534 NPLOC4Q8TAT6 608 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 VCPKMTQ9H867 229 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 KANSL2Q9H9L4 492 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 TMX2Q9Y320 296 aa11.32□□□□□ -0.6
BRCA1-226ENST00000591534 SIPA1L1O43166 1804 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 ATP5JP18859 108 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 PBX2P40425 430 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 RTP1P59025 263 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms