RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
VPS4B-207ENST00000591519 MYH7P12883 1935 aa12.49□□□□□ -0.41
VPS4B-207ENST00000591519 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 COBLO75128 1261 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 FLOT1O75955 427 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 SLC25A27O95847 323 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 CYBAP13498 195 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
VPS4B-207ENST00000591519 CYP2C19P33261 490 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 LRRC26Q2I0M4 334 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 LRIT3Q3SXY7 679 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 SPICE1Q8N0Z3 855 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 SLC5A4Q9NY91 659 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
VPS4B-207ENST00000591519 MYH8P13535 1937 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 ZNF236Q9UL36 1845 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
VPS4B-207ENST00000591519 DNM1LO00429 736 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 SOX1O00570 391 aaPredicted RBP12.47□□□□□ -0.41
VPS4B-207ENST00000591519 ZFYP08048 801 aaPredicted RBP12.47□□□□□ -0.41
VPS4B-207ENST00000591519 SYN1P17600 705 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 MAGEA10P43363 369 aaPredicted RBP12.47□□□□□ -0.41
VPS4B-207ENST00000591519 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 CLEC10AQ8IUN9 316 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 APPBP2Q92624 585 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 KCNK17Q96T54 332 aa12.47□□□□□ -0.41
VPS4B-207ENST00000591519 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
VPS4B-207ENST00000591519 SEPT4O43236 478 aa12.46□□□□□ -0.41
VPS4B-207ENST00000591519 FCER1AP12319 257 aa12.46□□□□□ -0.41
VPS4B-207ENST00000591519 CNGA1P29973 690 aa12.46□□□□□ -0.41
VPS4B-207ENST00000591519 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
VPS4B-207ENST00000591519 ARRDC4Q8NCT1 418 aa12.46□□□□□ -0.41
VPS4B-207ENST00000591519 SENP6Q9GZR1 1112 aaPredicted RBP12.46□□□□□ -0.41
VPS4B-207ENST00000591519 NYAP2Q9P242 653 aa12.46□□□□□ -0.41
VPS4B-207ENST00000591519 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
VPS4B-207ENST00000591519 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
VPS4B-207ENST00000591519 ZNFX1Q9P2E3 1918 aaKnown RBP12.46□□□□□ -0.42
VPS4B-207ENST00000591519 PARP14Q460N5 1801 aa12.46□□□□□ -0.42
VPS4B-207ENST00000591519 FRMPD3Q5JV73 1810 aa12.46□□□□□ -0.42
VPS4B-207ENST00000591519 LAMA3Q16787 3333 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 VWA5AO00534 786 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 GNAT2P19087 354 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 RASA1P20936 1047 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 STAT3P40763 770 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 PLS1Q14651 629 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 RIOX2Q8IUF8 465 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 TDHQ8IZJ6 230 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 LRCH3Q96II8 777 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 MAML3Q96JK9 1138 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 NRBP1Q9UHY1 535 aa12.45□□□□□ -0.42
VPS4B-207ENST00000591519 ZNF214Q9UL59 606 aaPredicted RBP12.45□□□□□ -0.42
VPS4B-207ENST00000591519 ROBO3Q96MS0 1386 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 TTC41PQ6P2S7 1318 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
VPS4B-207ENST00000591519 TK2O00142 265 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 HRO43593 1189 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 COPB2P35606 906 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 MKL1Q969V6 931 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 UBE2OQ9C0C9 1292 aaKnown RBP12.44□□□□□ -0.42
VPS4B-207ENST00000591519 MKNK2Q9HBH9 465 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 FBXO28Q9NVF7 368 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 SYNPO2Q9UMS6 1093 aa12.44□□□□□ -0.42
VPS4B-207ENST00000591519 GREB1LQ9C091 1923 aaPredicted RBP12.44□□□□□ -0.42
VPS4B-207ENST00000591519 IGKV6D-41A0A0C4DH26 115 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 F5H6K3 240 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 KLRC3Q07444 240 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
VPS4B-207ENST00000591519 ZNF792Q3KQV3 632 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 FAM83BQ5T0W9 1011 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 C1orf53Q5VUE5 145 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 MMP19Q99542 508 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 ZNF287Q9HBT7 754 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 PCDHB15Q9Y5E8 787 aa12.43□□□□□ -0.42
VPS4B-207ENST00000591519 SMCHD1A6NHR9 2005 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 COL11A1P12107 1806 aaPredicted RBP12.42□□□□□ -0.42
VPS4B-207ENST00000591519 ATP2A1O14983 1001 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 GPAA1O43292 621 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 KCTD2Q14681 263 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 SNX17Q15036 470 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 GJC2Q5T442 439 aaPredicted RBP12.42□□□□□ -0.42
VPS4B-207ENST00000591519 SLC39A5Q6ZMH5 540 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
VPS4B-207ENST00000591519 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
VPS4B-207ENST00000591519 CRBNQ96SW2 442 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 TINF2Q9BSI4 451 aa12.42□□□□□ -0.42
VPS4B-207ENST00000591519 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
VPS4B-207ENST00000591519 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
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