RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 KBTBD3Q8NAB2 608 aa30.7■■■□□ 2.51
CAPNS1-211ENST00000590874 CDX2Q99626 313 aaPredicted RBP30.7■■■□□ 2.51
CAPNS1-211ENST00000590874 EPB41L4AQ9HCS5 686 aaPredicted RBP30.7■■■□□ 2.51
CAPNS1-211ENST00000590874 UNC80Q8N2C7 3258 aa30.69■■■□□ 2.5
CAPNS1-211ENST00000590874 TSHZ3Q63HK5 1081 aa30.69■■■□□ 2.5
CAPNS1-211ENST00000590874 GIMAP6Q6P9H5 292 aa30.69■■■□□ 2.5
CAPNS1-211ENST00000590874 COL25A1Q9BXS0 654 aaPredicted RBP30.69■■■□□ 2.5
CAPNS1-211ENST00000590874 PLXNA1Q9UIW2 1896 aa30.69■■■□□ 2.5
CAPNS1-211ENST00000590874 IGKV6D-41A0A0C4DH26 115 aa30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 PQBP1O60828 265 aaKnown RBP30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 SNAI1O95863 264 aaPredicted RBP30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 EPHB4P54760 987 aa30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 SMAD3P84022 425 aaKnown RBP30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 APPBP2Q92624 585 aa30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 SEMA6BQ9H3T3 888 aa30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 SYNRGQ9UMZ2 1314 aa30.68■■■□□ 2.5
CAPNS1-211ENST00000590874 DNAJC25-GNG10A0A024R161 153 aa30.67■■■□□ 2.5
CAPNS1-211ENST00000590874 KIAA0355O15063 1070 aa30.67■■■□□ 2.5
CAPNS1-211ENST00000590874 MSL3Q8N5Y2 521 aaKnown RBP30.67■■■□□ 2.5
CAPNS1-211ENST00000590874 PRPF38AQ8NAV1 312 aaKnown RBP30.67■■■□□ 2.5
CAPNS1-211ENST00000590874 TTYH1Q9H313 450 aaPredicted RBP30.67■■■□□ 2.5
CAPNS1-211ENST00000590874 CLIP2Q9UDT6 1046 aa30.67■■■□□ 2.5
CAPNS1-211ENST00000590874 SMCHD1A6NHR9 2005 aa30.66■■■□□ 2.5
CAPNS1-211ENST00000590874 CPXCR1Q8N123 301 aa30.66■■■□□ 2.5
CAPNS1-211ENST00000590874 DDX11Q96FC9 970 aa30.66■■■□□ 2.5
CAPNS1-211ENST00000590874 SYNGAP1Q96PV0 1343 aa30.66■■■□□ 2.5
CAPNS1-211ENST00000590874 ATP2A1O14983 1001 aa30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 GPAA1O43292 621 aa30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 PRDM1O75626 825 aa30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 SLC4A3P48751 1232 aa30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 ACLYP53396 1101 aa30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 MAMDC4Q6UXC1 1216 aa30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 TSEN34Q9BSV6 310 aaKnown RBP30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 ZHX1Q9UKY1 873 aaPredicted RBP30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 FAM184BQ9ULE4 1060 aa30.65■■■□□ 2.5
CAPNS1-211ENST00000590874 M0R2C6 588 aa30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 RNF113AO15541 343 aaKnown RBP30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 RAG1P15918 1043 aa30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 KLHDC9Q8NEP7 349 aa30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 KIFC2Q96AC6 838 aa30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 RNPC3Q96LT9 517 aaKnown RBP30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 RAVER2Q9HCJ3 691 aaKnown RBP30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 STARD7Q9NQZ5 370 aa30.64■■■□□ 2.5
CAPNS1-211ENST00000590874 MYADML2A6NDP7 307 aa30.63■■■□□ 2.49
CAPNS1-211ENST00000590874 TDO2P48775 406 aa30.63■■■□□ 2.49
CAPNS1-211ENST00000590874 FAAP100Q0VG06 881 aa30.63■■■□□ 2.49
CAPNS1-211ENST00000590874 CCSAPQ6IQ19 270 aaPredicted RBP30.63■■■□□ 2.49
CAPNS1-211ENST00000590874 ANKRD33Q7Z3H0 272 aa30.63■■■□□ 2.49
CAPNS1-211ENST00000590874 CEP95Q96GE4 821 aa30.63■■■□□ 2.49
CAPNS1-211ENST00000590874 TMEM39AQ9NV64 488 aa30.63■■■□□ 2.49
CAPNS1-211ENST00000590874 ZBED4O75132 1171 aa30.62■■■□□ 2.49
CAPNS1-211ENST00000590874 IRX5P78411 483 aaPredicted RBP30.62■■■□□ 2.49
CAPNS1-211ENST00000590874 ZNF467Q7Z7K2 595 aaPredicted RBP30.62■■■□□ 2.49
CAPNS1-211ENST00000590874 LRRC47Q8N1G4 583 aaKnown RBP30.62■■■□□ 2.49
CAPNS1-211ENST00000590874 MYLIPQ8WY64 445 aa30.62■■■□□ 2.49
CAPNS1-211ENST00000590874 FGD4Q96M96 766 aa30.62■■■□□ 2.49
CAPNS1-211ENST00000590874 SLC38A10Q9HBR0 1119 aa30.62■■■□□ 2.49
CAPNS1-211ENST00000590874 MOXD2PA6NHM9 499 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 ADCY6O43306 1168 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 FPGSQ05932 587 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 KCNA10Q16322 511 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 ZNF444Q8N0Y2 327 aaPredicted RBP30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 MAFAQ8NHW3 353 aaPredicted RBP30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 MKL1Q969V6 931 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 GPATCH3Q96I76 525 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 TOX2Q96NM4 488 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 MTMR4Q9NYA4 1195 aa30.61■■■□□ 2.49
CAPNS1-211ENST00000590874 ZFYP08048 801 aaPredicted RBP30.6■■■□□ 2.49
CAPNS1-211ENST00000590874 GNAT2P19087 354 aa30.6■■■□□ 2.49
CAPNS1-211ENST00000590874 NUP133Q8WUM0 1156 aa30.6■■■□□ 2.49
CAPNS1-211ENST00000590874 DCTPP1Q9H773 170 aa30.6■■■□□ 2.49
CAPNS1-211ENST00000590874 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.6■■■□□ 2.49
CAPNS1-211ENST00000590874 FEM1BQ9UK73 627 aa30.6■■■□□ 2.49
CAPNS1-211ENST00000590874 CTDP1Q9Y5B0 961 aaPredicted RBP30.6■■■□□ 2.49
CAPNS1-211ENST00000590874 CUL9Q8IWT3 2517 aa30.59■■■□□ 2.49
CAPNS1-211ENST00000590874 DUSP11O75319 330 aaKnown RBP30.59■■■□□ 2.49
CAPNS1-211ENST00000590874 APPP05067 770 aa30.59■■■□□ 2.49
CAPNS1-211ENST00000590874 ACVR2BQ13705 512 aa30.59■■■□□ 2.49
CAPNS1-211ENST00000590874 EYSQ5T1H1 3165 aa30.59■■■□□ 2.49
CAPNS1-211ENST00000590874 DCDC2CA8MYV0 355 aa30.58■■■□□ 2.49
CAPNS1-211ENST00000590874 TTLL1O95922 423 aa30.58■■■□□ 2.49
CAPNS1-211ENST00000590874 CST5P28325 142 aaPredicted RBP30.58■■■□□ 2.49
CAPNS1-211ENST00000590874 ANKRD35Q8N283 1001 aa30.58■■■□□ 2.49
CAPNS1-211ENST00000590874 GMCL1P1Q8NEA9 526 aa30.58■■■□□ 2.49
CAPNS1-211ENST00000590874 ZNF287Q9HBT7 754 aa30.58■■■□□ 2.49
CAPNS1-211ENST00000590874 SYNPO2Q9UMS6 1093 aa30.58■■■□□ 2.49
CAPNS1-211ENST00000590874 PLIN4Q96Q06 1357 aa30.57■■■□□ 2.48
CAPNS1-211ENST00000590874 PATL2C9JE40 543 aaKnown RBP30.57■■■□□ 2.48
CAPNS1-211ENST00000590874 IFNL3Q8IZI9 196 aa30.57■■■□□ 2.48
CAPNS1-211ENST00000590874 CDH23Q9H251 3354 aa30.57■■■□□ 2.48
CAPNS1-211ENST00000590874 C6orf222P0C671 652 aaPredicted RBP30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 OAZ1P54368 228 aa30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 CCDC144BQ3MJ40 725 aa30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 ARMCX2Q7L311 632 aa30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 CHST13Q8NET6 341 aa30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 SEC62Q99442 399 aaKnown RBP30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 FBXO40Q9UH90 709 aa30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 TBX21Q9UL17 535 aa30.56■■■□□ 2.48
CAPNS1-211ENST00000590874 SLFN13Q68D06 897 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms