RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 MCM3APO60318 1980 aa17.66■□□□□ 0.42
ERCC1-211ENST00000590701 PPIGQ13427 754 aaKnown RBP eCLIP17.66■□□□□ 0.423e-7■■■■■ 28.4
ERCC1-211ENST00000590701 FAM83BQ5T0W9 1011 aa17.66■□□□□ 0.42
ERCC1-211ENST00000590701 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
ERCC1-211ENST00000590701 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
ERCC1-211ENST00000590701 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
ERCC1-211ENST00000590701 THEGQ9P2T0 379 aa17.66■□□□□ 0.42
ERCC1-211ENST00000590701 ZHX1Q9UKY1 873 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-211ENST00000590701 RIPK3Q9Y572 518 aa17.66■□□□□ 0.42
ERCC1-211ENST00000590701 MOXD2PA6NHM9 499 aa17.65■□□□□ 0.42
ERCC1-211ENST00000590701 GOLIM4O00461 696 aa17.65■□□□□ 0.42
ERCC1-211ENST00000590701 ADCY6O43306 1168 aa17.65■□□□□ 0.42
ERCC1-211ENST00000590701 ASGR1P07306 291 aa17.65■□□□□ 0.42
ERCC1-211ENST00000590701 MRPS5P82675 430 aaKnown RBP17.65■□□□□ 0.42
ERCC1-211ENST00000590701 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-211ENST00000590701 TMED8Q6PL24 325 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-211ENST00000590701 DDX11Q96FC9 970 aa17.65■□□□□ 0.42
ERCC1-211ENST00000590701 NECAB3Q96P71 396 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-211ENST00000590701 NKX2-4Q9H2Z4 354 aa17.65■□□□□ 0.42
ERCC1-211ENST00000590701 CXXC1Q9P0U4 656 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-211ENST00000590701 PPP1R9AQ9ULJ8 1098 aa17.65■□□□□ 0.42
ERCC1-211ENST00000590701 DUSP11O75319 330 aaKnown RBP17.64■□□□□ 0.41
ERCC1-211ENST00000590701 CHGBP05060 677 aa17.64■□□□□ 0.41
ERCC1-211ENST00000590701 C6orf222P0C671 652 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-211ENST00000590701 CYP2C18P33260 490 aa17.64■□□□□ 0.41
ERCC1-211ENST00000590701 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
ERCC1-211ENST00000590701 TMEM199Q8N511 208 aa17.64■□□□□ 0.41
ERCC1-211ENST00000590701 GLT1D1Q96MS3 346 aa17.64■□□□□ 0.41
ERCC1-211ENST00000590701 UHRF1Q96T88 793 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-211ENST00000590701 DNAJC2Q99543 621 aaKnown RBP17.64■□□□□ 0.41
ERCC1-211ENST00000590701 NUP88Q99567 741 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-211ENST00000590701 CHD9Q3L8U1 2897 aa17.64■□□□□ 0.41
ERCC1-211ENST00000590701 NCOR1O75376 2440 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 USP17L12C9JPN9 530 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 USP17L21D6R901 530 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 ARVCFO00192 962 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 RLBP1P12271 317 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 ACVR2BQ13705 512 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 CCDC17Q96LX7 622 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 MSRAQ9UJ68 235 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 ELP1O95163 1332 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
ERCC1-211ENST00000590701 APBB1O00213 710 aa17.62■□□□□ 0.41
ERCC1-211ENST00000590701 MBD4O95243 580 aa17.62■□□□□ 0.41
ERCC1-211ENST00000590701 GNASQ5JWF2 1037 aa17.62■□□□□ 0.41
ERCC1-211ENST00000590701 SNRNP48Q6IEG0 339 aaKnown RBP17.62■□□□□ 0.41
ERCC1-211ENST00000590701 MAMDC4Q6UXC1 1216 aa17.62■□□□□ 0.41
ERCC1-211ENST00000590701 ITPRIPQ8IWB1 547 aa17.62■□□□□ 0.41
ERCC1-211ENST00000590701 CPXCR1Q8N123 301 aa17.62■□□□□ 0.41
ERCC1-211ENST00000590701 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.62■□□□□ 0.41
ERCC1-211ENST00000590701 KANSL2Q9H9L4 492 aa17.62■□□□□ 0.41
ERCC1-211ENST00000590701 YBX2Q9Y2T7 364 aaKnown RBP17.62■□□□□ 0.41
ERCC1-211ENST00000590701 DNAJC25-GNG10A0A024R161 153 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 PLA2G5P39877 138 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 BEX3Q00994 111 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 CCDC144BQ3MJ40 725 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 CCDC174Q6PII3 467 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 C16orf86Q6ZW13 317 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 FAM126BQ8IXS8 530 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 PCSK9Q8NBP7 692 aaKnown RBP17.61■□□□□ 0.41
ERCC1-211ENST00000590701 RHPN1Q8TCX5 695 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 FAM122AQ96E09 287 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 IL23AQ9NPF7 189 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 ATP8A2Q9NTI2 1148 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.61■□□□□ 0.41
ERCC1-211ENST00000590701 MROH7Q68CQ1 1323 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 SYNGAP1Q96PV0 1343 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 REV3LO60673 3130 aa17.61■□□□□ 0.41
ERCC1-211ENST00000590701 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-211ENST00000590701 CTAGE5O15320 804 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 FGBP02675 491 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 MYOGP15173 224 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 CST5P28325 142 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-211ENST00000590701 RABGGTBP53611 331 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 GJA9P57773 515 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 OTOP2Q7RTS6 562 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 STK11IPQ8N1F8 1099 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
ERCC1-211ENST00000590701 HERVK_113Q902F9 699 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 FGD4Q96M96 766 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 UMODL1Q5DID0 1318 aa17.6■□□□□ 0.41
ERCC1-211ENST00000590701 CD4P01730 458 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 BMP1P13497 986 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 COPB2P35606 906 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 ADD2P35612 726 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 TFF2Q03403 129 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 PSRC1Q6PGN9 363 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-211ENST00000590701 ERC1Q8IUD2 1116 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 MICALL1Q8N3F8 863 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 SLF1Q9BQI6 1058 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 UPF3AQ9H1J1 476 aaKnown RBP17.59■□□□□ 0.41
ERCC1-211ENST00000590701 SLC28A3Q9HAS3 691 aa17.59■□□□□ 0.41
ERCC1-211ENST00000590701 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
ERCC1-211ENST00000590701 BDP1A6H8Y1 2624 aa17.58■□□□□ 0.41
ERCC1-211ENST00000590701 TLR3O15455 904 aaKnown RBP17.58■□□□□ 0.4
ERCC1-211ENST00000590701 PTGS1P23219 599 aa17.58■□□□□ 0.4
ERCC1-211ENST00000590701 CCL23P55773 120 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms