RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ZBED4O75132 1171 aa25.93■■□□□ 1.74
DDX39A-215ENST00000590696 ZNF865P0CJ78 1059 aaPredicted RBP25.93■■□□□ 1.74
DDX39A-215ENST00000590696 SNX17Q15036 470 aa25.93■■□□□ 1.74
DDX39A-215ENST00000590696 TRIM60Q495X7 471 aa25.93■■□□□ 1.74
DDX39A-215ENST00000590696 KIFC2Q96AC6 838 aa25.93■■□□□ 1.74
DDX39A-215ENST00000590696 DDX11Q96FC9 970 aa25.93■■□□□ 1.74
DDX39A-215ENST00000590696 SMCHD1A6NHR9 2005 aa25.93■■□□□ 1.74
DDX39A-215ENST00000590696 ATP2A1O14983 1001 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 TTLL1O95922 423 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 PGK1P00558 417 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 PDE4BQ07343 736 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 ZMYM1Q5SVZ6 1142 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 LRRC47Q8N1G4 583 aaKnown RBP25.92■■□□□ 1.74
DDX39A-215ENST00000590696 SLC17A8Q8NDX2 589 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 NAPBQ9H115 298 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 PRDM5Q9NQX1 630 aaPredicted RBP25.92■■□□□ 1.74
DDX39A-215ENST00000590696 CNPY2Q9Y2B0 182 aa25.92■■□□□ 1.74
DDX39A-215ENST00000590696 TSPY3P0CV98 308 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 TSPY8P0CW00 308 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 AKR1A1P14550 325 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 RNF180Q86T96 592 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 NEDD1Q8NHV4 660 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 RAVER2Q9HCJ3 691 aaKnown RBP25.91■■□□□ 1.74
DDX39A-215ENST00000590696 FEM1BQ9UK73 627 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 SYNPO2Q9UMS6 1093 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 PHF24Q9UPV7 400 aa25.91■■□□□ 1.74
DDX39A-215ENST00000590696 SLC3A2P08195 630 aaKnown RBP25.9■■□□□ 1.74
DDX39A-215ENST00000590696 MX1P20591 662 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 PPARAQ07869 468 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 C1orf53Q5VUE5 145 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 MSL3Q8N5Y2 521 aaKnown RBP25.9■■□□□ 1.74
DDX39A-215ENST00000590696 GMCL1P1Q8NEA9 526 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 SLC38A10Q9HBR0 1119 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 MTMR10Q9NXD2 777 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 LTBP2Q14767 1821 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 COL6A3P12111 3177 aa25.9■■□□□ 1.74
DDX39A-215ENST00000590696 DNAJC25-GNG10A0A024R161 153 aa25.89■■□□□ 1.74
DDX39A-215ENST00000590696 TFAP4Q01664 338 aa25.89■■□□□ 1.74
DDX39A-215ENST00000590696 SLFN13Q68D06 897 aa25.89■■□□□ 1.74
DDX39A-215ENST00000590696 LENG1Q96BZ8 264 aaPredicted RBP25.89■■□□□ 1.74
DDX39A-215ENST00000590696 PDLIM7Q9NR12 457 aa25.89■■□□□ 1.74
DDX39A-215ENST00000590696 PLIN4Q96Q06 1357 aa25.89■■□□□ 1.74
DDX39A-215ENST00000590696 SNAI1O95863 264 aaPredicted RBP25.88■■□□□ 1.73
DDX39A-215ENST00000590696 SH3RF1Q7Z6J0 888 aa25.88■■□□□ 1.73
DDX39A-215ENST00000590696 SYNGAP1Q96PV0 1343 aa25.88■■□□□ 1.73
DDX39A-215ENST00000590696 BMP3P12645 472 aa25.87■■□□□ 1.73
DDX39A-215ENST00000590696 TLE2Q04725 743 aa25.87■■□□□ 1.73
DDX39A-215ENST00000590696 MAMDC4Q6UXC1 1216 aa25.87■■□□□ 1.73
DDX39A-215ENST00000590696 BADQ92934 168 aa25.87■■□□□ 1.73
DDX39A-215ENST00000590696 FAM184BQ9ULE4 1060 aa25.87■■□□□ 1.73
DDX39A-215ENST00000590696 SALL3Q9BXA9 1300 aa25.87■■□□□ 1.73
DDX39A-215ENST00000590696 TRIM43BA6NCK2 446 aa25.86■■□□□ 1.73
DDX39A-215ENST00000590696 TMEM232C9JQI7 657 aa25.86■■□□□ 1.73
DDX39A-215ENST00000590696 ADAMTS4O75173 837 aa25.86■■□□□ 1.73
DDX39A-215ENST00000590696 RRP1P56182 461 aaKnown RBP25.86■■□□□ 1.73
DDX39A-215ENST00000590696 CCDC129Q6ZRS4 1044 aa25.86■■□□□ 1.73
DDX39A-215ENST00000590696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.86■■□□□ 1.73
DDX39A-215ENST00000590696 ANKRD35Q8N283 1001 aa25.86■■□□□ 1.73
DDX39A-215ENST00000590696 TRIM43Q96BQ3 446 aaPredicted RBP25.86■■□□□ 1.73
DDX39A-215ENST00000590696 FBXO40Q9UH90 709 aa25.86■■□□□ 1.73
DDX39A-215ENST00000590696 ZHX1Q9UKY1 873 aaPredicted RBP25.86■■□□□ 1.73
DDX39A-215ENST00000590696 ISY1Q9ULR0 285 aaKnown RBP25.86■■□□□ 1.73
DDX39A-215ENST00000590696 STXBP5LQ9Y2K9 1186 aa25.86■■□□□ 1.73
DDX39A-215ENST00000590696 A0A1W2PQ45 241 aaPredicted RBP25.85■■□□□ 1.73
DDX39A-215ENST00000590696 A0A1W2PQY0 241 aa25.85■■□□□ 1.73
DDX39A-215ENST00000590696 OAZ1P54368 228 aa25.85■■□□□ 1.73
DDX39A-215ENST00000590696 SHHQ15465 462 aa25.85■■□□□ 1.73
DDX39A-215ENST00000590696 ANKRD45Q5TZF3 282 aa25.85■■□□□ 1.73
DDX39A-215ENST00000590696 ZNF467Q7Z7K2 595 aaPredicted RBP25.85■■□□□ 1.73
DDX39A-215ENST00000590696 CHST13Q8NET6 341 aa25.85■■□□□ 1.73
DDX39A-215ENST00000590696 ZBTB47Q9UFB7 747 aaPredicted RBP25.85■■□□□ 1.73
DDX39A-215ENST00000590696 POTEB2H3BUK9 544 aa25.84■■□□□ 1.73
DDX39A-215ENST00000590696 FOXP2O15409 715 aa25.84■■□□□ 1.73
DDX39A-215ENST00000590696 CTDSPL2Q05D32 466 aa25.84■■□□□ 1.73
DDX39A-215ENST00000590696 CHMP4CQ96CF2 233 aa25.84■■□□□ 1.73
DDX39A-215ENST00000590696 TSEN34Q9BSV6 310 aaKnown RBP25.84■■□□□ 1.73
DDX39A-215ENST00000590696 TACC3Q9Y6A5 838 aa25.84■■□□□ 1.73
DDX39A-215ENST00000590696 SYNRGQ9UMZ2 1314 aa25.84■■□□□ 1.73
DDX39A-215ENST00000590696 FDX1P10109 184 aa25.83■■□□□ 1.73
DDX39A-215ENST00000590696 STAT2P52630 851 aa25.83■■□□□ 1.73
DDX39A-215ENST00000590696 ACVR2BQ13705 512 aa25.83■■□□□ 1.73
DDX39A-215ENST00000590696 C9orf50Q5SZB4 431 aa25.83■■□□□ 1.73
DDX39A-215ENST00000590696 INCENPQ9NQS7 918 aa25.83■■□□□ 1.73
DDX39A-215ENST00000590696 HOMER2Q9NSB8 354 aa25.83■■□□□ 1.73
DDX39A-215ENST00000590696 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.83■■□□□ 1.73
DDX39A-215ENST00000590696 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.83■■□□□ 1.73
DDX39A-215ENST00000590696 TSPY2A6NKD2 308 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 CLTBP09497 229 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 MCCP23508 829 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 ACLYP53396 1101 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 IKQ13123 557 aaPredicted RBP25.82■■□□□ 1.72
DDX39A-215ENST00000590696 FAM109BQ6ICB4 259 aaPredicted RBP25.82■■□□□ 1.72
DDX39A-215ENST00000590696 FAM160B2Q86V87 743 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 CHURC1Q8WUH1 139 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 GMCL1Q96IK5 515 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 FGD4Q96M96 766 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 CRBNQ96SW2 442 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 STX8Q9UNK0 236 aa25.82■■□□□ 1.72
DDX39A-215ENST00000590696 PQBP1O60828 265 aaKnown RBP25.81■■□□□ 1.72
DDX39A-215ENST00000590696 DUSP11O75319 330 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms