RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 FAM167BQ9BTA0 163 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 BABAM1Q9NWV8 329 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 DBNLQ9UJU6 430 aaKnown RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 CORO1CQ9ULV4 474 aaPredicted RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 NFU1Q9UMS0 254 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 CTNND2Q9UQB3 1225 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 FLT4P35916 1363 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 CEP170BQ9Y4F5 1589 aaPredicted RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 ESYT3A0FGR9 886 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 KRT86O43790 486 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 CXCR5P32302 372 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 CARSP49589 748 aaKnown RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 EMC10Q5UCC4 262 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 CWF19L1Q69YN2 538 aaKnown RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 SMCR8Q8TEV9 937 aaPredicted RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 NOC3LQ8WTT2 800 aaKnown RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 LTV1Q96GA3 475 aaPredicted RBP8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 ZCWPW1Q9H0M4 648 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 WDR70Q9NW82 654 aa8.6□□□□□ -1.03
NEDD4L-229ENST00000590506 ANKARQ7Z5J8 1434 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 SPATA31D1Q6ZQQ2 1576 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 AHCYL1O43865 530 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 HSPD1P10809 573 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 NEFHP12036 1026 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 COPB1P53618 953 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 GNPTABQ3T906 1256 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 NFXL1Q6ZNB6 911 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 USP49Q70CQ1 688 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 TRIM74Q86UV6 250 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 TRIM73Q86UV7 250 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 KLHL23Q8NBE8 558 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 AGAP11Q8TF27 550 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 PAIP2Q9BPZ3 127 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 MYH13Q9UKX3 1938 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 USP31Q70CQ4 1352 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 ZSCAN5CA6NGD5 496 aaPredicted RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 PRC1O43663 620 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 ACTN4O43707 911 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 RTN3O95197 1032 aaPredicted RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 FESP07332 822 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 GNAT1P11488 350 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 RXRAP19793 462 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 DPYDQ12882 1025 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 GLE1Q53GS7 698 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 C8orf74Q6P047 294 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 ELOA2Q8IYF1 753 aaPredicted RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 CCDC63Q8NA47 563 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 CCT6BQ92526 530 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 DSCC1Q9BVC3 393 aa8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-229ENST00000590506 MYH10P35580 1976 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 TTC26A0AVF1 554 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 ANO9A1A5B4 782 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PHF20L1A8MW92 1017 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 HMGB1P1B2RPK0 211 aaPredicted RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PES1O00541 588 aaKnown RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 TRAPPC3O43617 180 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 RANBP1P43487 201 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PAPOLAP51003 745 aaKnown RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 VAV2P52735 878 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 UBXN1Q04323 297 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 LAMB3Q13751 1172 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 NFRKBQ6P4R8 1299 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 TBC1D1Q86TI0 1168 aaPredicted RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PHKBQ93100 1093 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 RBM33Q96EV2 1170 aaKnown RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 L3MBTL3Q96JM7 780 aaPredicted RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PANK4Q9NVE7 773 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 NOP53Q9NZM5 478 aaKnown RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 SNX12Q9UMY4 172 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PLAAQ9Y263 795 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 RIMBP3CA6NJZ7 1639 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 RIMBP3BA6NNM3 1639 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 RIMBP3Q9UFD9 1639 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PALLDQ8WX93 1383 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 SH3TC1Q8TE82 1336 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 SRRM3A6NNA2 597 aaPredicted RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PPP1R3GB7ZBB8 358 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 PPIP5K2O43314 1243 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 KCNQ3O43525 872 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 GLI1P08151 1106 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 KRT83P78385 493 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 CYP27A1Q02318 531 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 TFCP2Q12800 502 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 TTF1Q15361 905 aaPredicted RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 WDR59Q6PJI9 974 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 CD302Q8IX05 232 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 RUBCNQ92622 972 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 EZH1Q92800 747 aaPredicted RBP8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 OSBPL9Q96SU4 736 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 DBNDD2Q9BQY9 259 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 LMCD1Q9NZU5 365 aa8.58□□□□□ -1.04
NEDD4L-229ENST00000590506 RFX7Q2KHR2 1363 aa8.57□□□□□ -1.04
NEDD4L-229ENST00000590506 UBE2Q2LH0YL09 131 aa8.57□□□□□ -1.04
NEDD4L-229ENST00000590506 ATP4AP20648 1035 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms