RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 DNAJC25-GNG10A0A024R161 153 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 ZNF865P0CJ78 1059 aaPredicted RBP21.44■■□□□ 1.02
H3F3B-209ENST00000589949 RTP1P59025 263 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 CPXCR1Q8N123 301 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 ARRDC4Q8NCT1 418 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 GMCL1P1Q8NEA9 526 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 KIFC2Q96AC6 838 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 LENG1Q96BZ8 264 aaPredicted RBP21.44■■□□□ 1.02
H3F3B-209ENST00000589949 CHMP4CQ96CF2 233 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 UBE2OQ9C0C9 1292 aaKnown RBP21.44■■□□□ 1.02
H3F3B-209ENST00000589949 ZNF287Q9HBT7 754 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 IL17RBQ9NRM6 502 aa21.44■■□□□ 1.02
H3F3B-209ENST00000589949 LAMA2P24043 3122 aaKnown RBP21.43■■□□□ 1.02
H3F3B-209ENST00000589949 ATP2A1O14983 1001 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 NMT2O60551 498 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 MYCNP04198 464 aaPredicted RBP21.43■■□□□ 1.02
H3F3B-209ENST00000589949 TSPY3P0CV98 308 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 TSPY8P0CW00 308 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 ADCYAP1R1P41586 468 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 PDE4BQ07343 736 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 SLFN13Q68D06 897 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 SLC39A5Q6ZMH5 540 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 RASGRP2Q7LDG7 609 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 TDHQ8IZJ6 230 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 FGD4Q96M96 766 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 SLC38A10Q9HBR0 1119 aa21.43■■□□□ 1.02
H3F3B-209ENST00000589949 SNAI1O95863 264 aaPredicted RBP21.42■■□□□ 1.02
H3F3B-209ENST00000589949 FERMT2Q96AC1 680 aa21.42■■□□□ 1.02
H3F3B-209ENST00000589949 EVI5LQ96CN4 794 aa21.42■■□□□ 1.02
H3F3B-209ENST00000589949 FAM227BQ96M60 508 aa21.42■■□□□ 1.02
H3F3B-209ENST00000589949 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
H3F3B-209ENST00000589949 NRBP1Q9UHY1 535 aa21.42■■□□□ 1.02
H3F3B-209ENST00000589949 FEM1BQ9UK73 627 aa21.42■■□□□ 1.02
H3F3B-209ENST00000589949 SYNPO2Q9UMS6 1093 aa21.42■■□□□ 1.02
H3F3B-209ENST00000589949 A0A0D9SFI3 127 aa21.41■■□□□ 1.02
H3F3B-209ENST00000589949 KBTBD13C9JR72 458 aa21.41■■□□□ 1.02
H3F3B-209ENST00000589949 PGK1P00558 417 aa21.41■■□□□ 1.02
H3F3B-209ENST00000589949 COPB2P35606 906 aa21.41■■□□□ 1.02
H3F3B-209ENST00000589949 LRIT3Q3SXY7 679 aa21.41■■□□□ 1.02
H3F3B-209ENST00000589949 ATP11BQ9Y2G3 1177 aa21.41■■□□□ 1.02
H3F3B-209ENST00000589949 COL6A3P12111 3177 aa21.41■■□□□ 1.02
H3F3B-209ENST00000589949 ZBED4O75132 1171 aa21.4■■□□□ 1.02
H3F3B-209ENST00000589949 BMP3P12645 472 aa21.4■■□□□ 1.02
H3F3B-209ENST00000589949 SNX17Q15036 470 aa21.4■■□□□ 1.02
H3F3B-209ENST00000589949 TRIM60Q495X7 471 aa21.4■■□□□ 1.02
H3F3B-209ENST00000589949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.4■■□□□ 1.02
H3F3B-209ENST00000589949 XPNPEP3Q9NQH7 507 aa21.4■■□□□ 1.02
H3F3B-209ENST00000589949 ZNF536O15090 1300 aa21.39■■□□□ 1.01
H3F3B-209ENST00000589949 TMEM232C9JQI7 657 aa21.39■■□□□ 1.01
H3F3B-209ENST00000589949 MCCP23508 829 aa21.39■■□□□ 1.01
H3F3B-209ENST00000589949 SH3RF1Q7Z6J0 888 aa21.39■■□□□ 1.01
H3F3B-209ENST00000589949 LNPKQ9C0E8 428 aa21.39■■□□□ 1.01
H3F3B-209ENST00000589949 ANAPC4Q9UJX5 808 aa21.39■■□□□ 1.01
H3F3B-209ENST00000589949 ADCY6O43306 1168 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 SLC3A2P08195 630 aaKnown RBP21.38■■□□□ 1.01
H3F3B-209ENST00000589949 RARBP10826 455 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 SNAP25P60880 206 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 IRX5P78411 483 aaPredicted RBP21.38■■□□□ 1.01
H3F3B-209ENST00000589949 ALX1Q15699 326 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 MAMDC4Q6UXC1 1216 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 Q7L0L9 218 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 ZNF589Q86UQ0 364 aaPredicted RBP21.38■■□□□ 1.01
H3F3B-209ENST00000589949 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 GMCL1Q96IK5 515 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 HELLSQ9NRZ9 838 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 PHF24Q9UPV7 400 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 LTBP2Q14767 1821 aa21.38■■□□□ 1.01
H3F3B-209ENST00000589949 ADAMTS4O75173 837 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 IGHDP01880 384 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 FGAP02671 866 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 FGRP09769 529 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 NOVP48745 357 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 KCTD1Q719H9 257 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 SMC5Q8IY18 1101 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 AGBL1Q96MI9 1066 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 HOMER2Q9NSB8 354 aa21.37■■□□□ 1.01
H3F3B-209ENST00000589949 ZBTB47Q9UFB7 747 aaPredicted RBP21.37■■□□□ 1.01
H3F3B-209ENST00000589949 SYNGAP1Q96PV0 1343 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 TRIM43BA6NCK2 446 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 TSPY2A6NKD2 308 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 AKR1A1P14550 325 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 OAZ1P54368 228 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 CNTN2Q02246 1040 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 NMIQ13287 307 aaPredicted RBP21.36■■□□□ 1.01
H3F3B-209ENST00000589949 TRIM43Q96BQ3 446 aaPredicted RBP21.36■■□□□ 1.01
H3F3B-209ENST00000589949 PDLIM7Q9NR12 457 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 STX8Q9UNK0 236 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 CNPY2Q9Y2B0 182 aa21.36■■□□□ 1.01
H3F3B-209ENST00000589949 MYADML2A6NDP7 307 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 ORC4O43929 436 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 RANBP6O60518 1105 aaKnown RBP21.35■■□□□ 1.01
H3F3B-209ENST00000589949 SLC1A4P43007 532 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 STAT2P52630 851 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 MCMDC2Q4G0Z9 681 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 C1orf53Q5VUE5 145 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 B4GALNT3Q6L9W6 998 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 ZNF467Q7Z7K2 595 aaPredicted RBP21.35■■□□□ 1.01
H3F3B-209ENST00000589949 MSL3Q8N5Y2 521 aaKnown RBP21.35■■□□□ 1.01
H3F3B-209ENST00000589949 CHST13Q8NET6 341 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms