RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ZNF287Q9HBT7 754 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 PRDM5Q9NQX1 630 aaPredicted RBP19.42■□□□□ 0.7
MBD3-206ENST00000589901 MTMR4Q9NYA4 1195 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 PGK1P00558 417 aa19.41■□□□□ 0.7
MBD3-206ENST00000589901 LRRFIP1Q32MZ4 808 aaKnown RBP19.41■□□□□ 0.7
MBD3-206ENST00000589901 SLC17A8Q8NDX2 589 aa19.41■□□□□ 0.7
MBD3-206ENST00000589901 KIFC2Q96AC6 838 aa19.41■□□□□ 0.7
MBD3-206ENST00000589901 RAVER2Q9HCJ3 691 aaKnown RBP19.41■□□□□ 0.7
MBD3-206ENST00000589901 ZBED4O75132 1171 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 ZMYM1Q5SVZ6 1142 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 SH3RF1Q7Z6J0 888 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 DDX11Q96FC9 970 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 MTMR10Q9NXD2 777 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 PHF24Q9UPV7 400 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 CNPY2Q9Y2B0 182 aa19.4■□□□□ 0.7
MBD3-206ENST00000589901 ATP2A1O14983 1001 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 TTLL1O95922 423 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 TSPY3P0CV98 308 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 TSPY8P0CW00 308 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 AKR1A1P14550 325 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 MX1P20591 662 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 RNF180Q86T96 592 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 GMCL1P1Q8NEA9 526 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 NEDD1Q8NHV4 660 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 NAPBQ9H115 298 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 SLC38A10Q9HBR0 1119 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 PDLIM7Q9NR12 457 aa19.39■□□□□ 0.69
MBD3-206ENST00000589901 CTDP1Q9Y5B0 961 aaPredicted RBP19.39■□□□□ 0.69
MBD3-206ENST00000589901 DNAJC25-GNG10A0A024R161 153 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 TRIM43BA6NCK2 446 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 SNAI1O95863 264 aaPredicted RBP19.38■□□□□ 0.69
MBD3-206ENST00000589901 TFAP4Q01664 338 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 TLE2Q04725 743 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 PDE4BQ07343 736 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 PPARAQ07869 468 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 C1orf53Q5VUE5 145 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 BADQ92934 168 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 TRIM43Q96BQ3 446 aaPredicted RBP19.38■□□□□ 0.69
MBD3-206ENST00000589901 FEM1BQ9UK73 627 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 SYNPO2Q9UMS6 1093 aa19.38■□□□□ 0.69
MBD3-206ENST00000589901 PLIN4Q96Q06 1357 aa19.37■□□□□ 0.69
MBD3-206ENST00000589901 FOXP2O15409 715 aa19.37■□□□□ 0.69
MBD3-206ENST00000589901 SLFN13Q68D06 897 aa19.37■□□□□ 0.69
MBD3-206ENST00000589901 MAMDC4Q6UXC1 1216 aa19.37■□□□□ 0.69
MBD3-206ENST00000589901 CCDC129Q6ZRS4 1044 aa19.37■□□□□ 0.69
MBD3-206ENST00000589901 MSL3Q8N5Y2 521 aaKnown RBP19.37■□□□□ 0.69
MBD3-206ENST00000589901 CHMP4CQ96CF2 233 aa19.37■□□□□ 0.69
MBD3-206ENST00000589901 ZNFX1Q9P2E3 1918 aaKnown RBP19.37■□□□□ 0.69
MBD3-206ENST00000589901 SYNGAP1Q96PV0 1343 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 SALL3Q9BXA9 1300 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 A0A1W2PQ45 241 aaPredicted RBP19.36■□□□□ 0.69
MBD3-206ENST00000589901 A0A1W2PQY0 241 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 POTEB2H3BUK9 544 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 ADAMTS4O75173 837 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 SLC3A2P08195 630 aaKnown RBP19.36■□□□□ 0.69
MBD3-206ENST00000589901 BMP3P12645 472 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 RRP1P56182 461 aaKnown RBP19.36■□□□□ 0.69
MBD3-206ENST00000589901 SHHQ15465 462 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 C9orf50Q5SZB4 431 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 ANKRD35Q8N283 1001 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 INCENPQ9NQS7 918 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 ZHX1Q9UKY1 873 aaPredicted RBP19.36■□□□□ 0.69
MBD3-206ENST00000589901 ISY1Q9ULR0 285 aaKnown RBP19.36■□□□□ 0.69
MBD3-206ENST00000589901 STXBP5LQ9Y2K9 1186 aa19.36■□□□□ 0.69
MBD3-206ENST00000589901 SYNRGQ9UMZ2 1314 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 TMEM232C9JQI7 657 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 ITGB8P26012 769 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 CTDSPL2Q05D32 466 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
MBD3-206ENST00000589901 FGD4Q96M96 766 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 FAM184BQ9ULE4 1060 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 LTBP2Q14767 1821 aa19.35■□□□□ 0.69
MBD3-206ENST00000589901 SMCHD1A6NHR9 2005 aa19.34■□□□□ 0.69
MBD3-206ENST00000589901 PQBP1O60828 265 aaKnown RBP19.34■□□□□ 0.69
MBD3-206ENST00000589901 OAZ1P54368 228 aa19.34■□□□□ 0.69
MBD3-206ENST00000589901 ANKRD45Q5TZF3 282 aa19.34■□□□□ 0.69
MBD3-206ENST00000589901 ZNF467Q7Z7K2 595 aaPredicted RBP19.34■□□□□ 0.69
MBD3-206ENST00000589901 CHST13Q8NET6 341 aa19.34■□□□□ 0.69
MBD3-206ENST00000589901 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
MBD3-206ENST00000589901 FBXO40Q9UH90 709 aa19.34■□□□□ 0.69
MBD3-206ENST00000589901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
MBD3-206ENST00000589901 TACC3Q9Y6A5 838 aa19.34■□□□□ 0.69
MBD3-206ENST00000589901 PLXNA1Q9UIW2 1896 aa19.33■□□□□ 0.69
MBD3-206ENST00000589901 MYADML2A6NDP7 307 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 ADCY6O43306 1168 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 NMT2O60551 498 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 CLTBP09497 229 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 MCCP23508 829 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 STAT2P52630 851 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 ACLYP53396 1101 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 IRX5P78411 483 aaPredicted RBP19.33■□□□□ 0.68
MBD3-206ENST00000589901 ACVR2BQ13705 512 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 VPS53Q5VIR6 699 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 FAM109BQ6ICB4 259 aaPredicted RBP19.33■□□□□ 0.68
MBD3-206ENST00000589901 GMCL1Q96IK5 515 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 FAM161BQ96MY7 647 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 CRBNQ96SW2 442 aa19.33■□□□□ 0.68
MBD3-206ENST00000589901 IL17RBQ9NRM6 502 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms