RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 UBAC1Q9BSL1 405 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 LSG1Q9H089 658 aaKnown RBP11.88□□□□□ -0.51
TPM4-207ENST00000588032 SLC5A4Q9NY91 659 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 RBM8AQ9Y5S9 174 aaKnown RBP11.88□□□□□ -0.51
TPM4-207ENST00000588032 MGAMO43451 1857 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 HOXC6P09630 235 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 CYP2B6P20813 491 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 IKQ13123 557 aaPredicted RBP11.87□□□□□ -0.51
TPM4-207ENST00000588032 GRB14Q14449 540 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 RNF20Q5VTR2 975 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
TPM4-207ENST00000588032 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 REPS2Q8NFH8 660 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 NKX2-3Q8TAU0 364 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 TEX13BQ9BXU2 312 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 SLC38A10Q9HBR0 1119 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 ANO2Q9NQ90 1003 aa11.87□□□□□ -0.51
TPM4-207ENST00000588032 ZNF214Q9UL59 606 aaPredicted RBP11.87□□□□□ -0.51
TPM4-207ENST00000588032 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
TPM4-207ENST00000588032 ZSWIM8A7E2V4 1837 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 MYH4Q9Y623 1939 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 ERICH2A1L162 156 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 E7EWF7 191 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 ABCB7O75027 752 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 HMGCRP04035 888 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 FCER1AP12319 257 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 SART3Q15020 963 aaKnown RBP11.86□□□□□ -0.51
TPM4-207ENST00000588032 NECTIN1Q15223 517 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 CCDC96Q2M329 555 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
TPM4-207ENST00000588032 BTNL9Q6UXG8 535 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 DPP9Q86TI2 863 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 APBA2Q99767 749 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 MTA3Q9BTC8 594 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 KAT14Q9H8E8 782 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 PNMA2Q9UL42 364 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 RLFQ13129 1914 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 TNKSO95271 1327 aa11.86□□□□□ -0.51
TPM4-207ENST00000588032 INHAP05111 366 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 PDHBP11177 359 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 ELNP15502 786 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 ZKSCAN1P17029 563 aaPredicted RBP11.85□□□□□ -0.51
TPM4-207ENST00000588032 SOX10P56693 466 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 KCTD2Q14681 263 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 IFIT1BQ5T764 474 aaKnown RBP11.85□□□□□ -0.51
TPM4-207ENST00000588032 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
TPM4-207ENST00000588032 CPXCR1Q8N123 301 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 ENAHQ8N8S7 591 aaPredicted RBP11.85□□□□□ -0.51
TPM4-207ENST00000588032 PNMA1Q8ND90 353 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 CHST13Q8NET6 341 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
TPM4-207ENST00000588032 A0A0G2JMZ2 1700 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 SLC27A2O14975 620 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 GJB1P08034 283 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 CCL5P13501 91 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 ADORA2AP29274 412 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 ZNF543Q08ER8 600 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 SEC23AQ15436 765 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 TKFCQ3LXA3 575 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 MFSD14CQ5VZR4 134 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 CREB3L3Q68CJ9 461 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
TPM4-207ENST00000588032 TRIB2Q92519 343 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 MMP19Q99542 508 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
TPM4-207ENST00000588032 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
TPM4-207ENST00000588032 PRR12Q9ULL5 1215 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 DIS3Q9Y2L1 958 aaKnown RBP11.84□□□□□ -0.51
TPM4-207ENST00000588032 RPTORQ8N122 1335 aa11.84□□□□□ -0.51
TPM4-207ENST00000588032 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 IFIT3O14879 490 aaKnown RBP11.83□□□□□ -0.52
TPM4-207ENST00000588032 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
TPM4-207ENST00000588032 REC8O95072 547 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 MCM5P33992 734 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 MLLT1Q03111 559 aaPredicted RBP11.83□□□□□ -0.52
TPM4-207ENST00000588032 MTFR1Q15390 333 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 TSGA10IPQ3SY00 556 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 ASPRV1Q53RT3 343 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 OLFML2BQ68BL8 750 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 STOX1Q6ZVD7 989 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 TMTC2Q8N394 836 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
TPM4-207ENST00000588032 PARP14Q460N5 1801 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 MYCP01106 439 aaPredicted RBP11.82□□□□□ -0.52
TPM4-207ENST00000588032 ICAM1P05362 532 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 PARP1P09874 1014 aaKnown RBP11.82□□□□□ -0.52
TPM4-207ENST00000588032 GJA8P48165 433 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 KRT32Q14532 448 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 WTAPQ15007 396 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 MAP3K21Q5TCX8 1036 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 TTBK2Q6IQ55 1244 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 MB21D2Q8IYB1 491 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms