RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 FSD1Q9BTV5 496 aa18.73■□□□□ 0.59
NCLN-203ENST00000587740 FBXO28Q9NVF7 368 aa18.73■□□□□ 0.59
NCLN-203ENST00000587740 MYH8P13535 1937 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 RAG1P15918 1043 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 ICA1Q05084 483 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 FAAP100Q0VG06 881 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 UBE3CQ15386 1083 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 SLFNL1Q499Z3 407 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 RNF180Q86T96 592 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 MMP19Q99542 508 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 ARHGEF10LQ9HCE6 1279 aa18.72■□□□□ 0.59
NCLN-203ENST00000587740 BAZ2AQ9UIF9 1905 aaKnown RBP18.72■□□□□ 0.59
NCLN-203ENST00000587740 ROBO3Q96MS0 1386 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 CHD9Q3L8U1 2897 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 WDR46O15213 610 aaKnown RBP18.71■□□□□ 0.59
NCLN-203ENST00000587740 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
NCLN-203ENST00000587740 PRKAB2O43741 272 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 ADAMTS4O75173 837 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 SLC25A27O95847 323 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 ZFYP08048 801 aaPredicted RBP18.71■□□□□ 0.59
NCLN-203ENST00000587740 DNAJB2P25686 324 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 FPGSQ05932 587 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 RIOX2Q8IUF8 465 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 SYMPKQ92797 1274 aaKnown RBP18.71■□□□□ 0.59
NCLN-203ENST00000587740 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 TMEM39AQ9NV64 488 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 SWAP70Q9UH65 585 aa18.71■□□□□ 0.59
NCLN-203ENST00000587740 ANKRD33Q7Z3H0 272 aa18.7■□□□□ 0.58
NCLN-203ENST00000587740 REPS2Q8NFH8 660 aa18.7■□□□□ 0.58
NCLN-203ENST00000587740 ARMT1Q9H993 441 aa18.7■□□□□ 0.58
NCLN-203ENST00000587740 ZNF214Q9UL59 606 aaPredicted RBP18.7■□□□□ 0.58
NCLN-203ENST00000587740 DIS3Q9Y2L1 958 aaKnown RBP18.7■□□□□ 0.58
NCLN-203ENST00000587740 NCOR1O75376 2440 aa18.69■□□□□ 0.58
NCLN-203ENST00000587740 CYP2D7A0A087X1C5 515 aa18.69■□□□□ 0.58
NCLN-203ENST00000587740 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.69■□□□□ 0.58
NCLN-203ENST00000587740 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.69■□□□□ 0.58
NCLN-203ENST00000587740 CHGBP05060 677 aa18.69■□□□□ 0.58
NCLN-203ENST00000587740 AKR1A1P14550 325 aa18.69■□□□□ 0.58
NCLN-203ENST00000587740 STAT3P40763 770 aa18.69■□□□□ 0.58
NCLN-203ENST00000587740 TOX2Q96NM4 488 aa18.69■□□□□ 0.58
NCLN-203ENST00000587740 VWA5AO00534 786 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 MBD4O95243 580 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
NCLN-203ENST00000587740 CDK8P49336 464 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 ACLYP53396 1101 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 IRX5P78411 483 aaPredicted RBP18.68■□□□□ 0.58
NCLN-203ENST00000587740 KCTD2Q14681 263 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 TJAP1Q5JTD0 557 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 CCSAPQ6IQ19 270 aaPredicted RBP18.68■□□□□ 0.58
NCLN-203ENST00000587740 C16orf59Q7L2K0 433 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 KLHDC9Q8NEP7 349 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 APPBP2Q92624 585 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.68■□□□□ 0.586e-7■■□□□ 12.2
NCLN-203ENST00000587740 TSEN34Q9BSV6 310 aaKnown RBP18.68■□□□□ 0.58
NCLN-203ENST00000587740 ZNF576Q9H609 170 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
NCLN-203ENST00000587740 TTC22Q5TAA0 569 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 C12orf60Q5U649 245 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 TICAM2Q86XR7 235 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 TIFAQ96CG3 184 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 CCDC17Q96LX7 622 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 PUS7LQ9H0K6 701 aaKnown RBP18.67■□□□□ 0.58
NCLN-203ENST00000587740 STARD7Q9NQZ5 370 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 TBX21Q9UL17 535 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 SYNRGQ9UMZ2 1314 aa18.67■□□□□ 0.58
NCLN-203ENST00000587740 MYADML2A6NDP7 307 aa18.66■□□□□ 0.58
NCLN-203ENST00000587740 SNAI1O95863 264 aaPredicted RBP18.66■□□□□ 0.58
NCLN-203ENST00000587740 TIMP1P01033 207 aa18.66■□□□□ 0.58
NCLN-203ENST00000587740 PBX2P40425 430 aa18.66■□□□□ 0.58
NCLN-203ENST00000587740 KCNA10Q16322 511 aa18.66■□□□□ 0.58
NCLN-203ENST00000587740 CHD7Q9P2D1 2997 aa18.66■□□□□ 0.58
NCLN-203ENST00000587740 GRXCR1A8MXD5 290 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 DCDC2CA8MYV0 355 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 USP17L12C9JPN9 530 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 USP17L21D6R901 530 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 TMEM240Q5SV17 173 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 FAM83BQ5T0W9 1011 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 C16orf86Q6ZW13 317 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 OSBP2Q969R2 916 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
NCLN-203ENST00000587740 ATP8A2Q9NTI2 1148 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
NCLN-203ENST00000587740 MOXD2PA6NHM9 499 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 TNFRSF10AO00220 468 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 ADCY6O43306 1168 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 CDK7P50613 346 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 RASIP1Q5U651 963 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 MFSD5Q6N075 450 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 NUP133Q8WUM0 1156 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 PBX4Q9BYU1 374 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 KANSL2Q9H9L4 492 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 RIPK3Q9Y572 518 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 MCM3APO60318 1980 aa18.64■□□□□ 0.57
NCLN-203ENST00000587740 DNAJC25-GNG10A0A024R161 153 aa18.63■□□□□ 0.57
NCLN-203ENST00000587740 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
NCLN-203ENST00000587740 COL9A1P20849 921 aa18.63■□□□□ 0.57
NCLN-203ENST00000587740 MAMDC4Q6UXC1 1216 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms