RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 RASIP1Q5U651 963 aa17.67■□□□□ 0.42
LRFN3-203ENST00000587257 CCSAPQ6IQ19 270 aaPredicted RBP17.67■□□□□ 0.42
LRFN3-203ENST00000587257 PCSK9Q8NBP7 692 aaKnown RBP17.67■□□□□ 0.42
LRFN3-203ENST00000587257 IL27Q8NEV9 243 aa17.67■□□□□ 0.42
LRFN3-203ENST00000587257 REPS2Q8NFH8 660 aa17.67■□□□□ 0.42
LRFN3-203ENST00000587257 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
LRFN3-203ENST00000587257 IL1RAPL2Q9NP60 686 aa17.67■□□□□ 0.42
LRFN3-203ENST00000587257 MYADML2A6NDP7 307 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 APBB1O00213 710 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 MBD4O95243 580 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
LRFN3-203ENST00000587257 C6orf222P0C671 652 aaPredicted RBP17.66■□□□□ 0.42
LRFN3-203ENST00000587257 CDK8P49336 464 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 MRPS5P82675 430 aaKnown RBP17.66■□□□□ 0.42
LRFN3-203ENST00000587257 RAB30Q15771 203 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 MAMDC4Q6UXC1 1216 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 C16orf59Q7L2K0 433 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
LRFN3-203ENST00000587257 VTI1AQ96AJ9 217 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 DDRGK1Q96HY6 314 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 SPC25Q9HBM1 224 aa17.66■□□□□ 0.42
LRFN3-203ENST00000587257 A0A0U1RQG5 324 aaPredicted RBP17.65■□□□□ 0.42
LRFN3-203ENST00000587257 PRKAB2O43741 272 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 ASGR1P07306 291 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 CDK7P50613 346 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 SNRNP48Q6IEG0 339 aaKnown RBP17.65■□□□□ 0.42
LRFN3-203ENST00000587257 C16orf86Q6ZW13 317 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 UHRF1Q96T88 793 aaPredicted RBP17.65■□□□□ 0.42
LRFN3-203ENST00000587257 SLF1Q9BQI6 1058 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 MTIF3Q9H2K0 278 aaKnown RBP17.65■□□□□ 0.42
LRFN3-203ENST00000587257 MSRAQ9UJ68 235 aa17.65■□□□□ 0.42
LRFN3-203ENST00000587257 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 CYP2D7A0A087X1C5 515 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 USP17L12C9JPN9 530 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 USP17L21D6R901 530 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 ARVCFO00192 962 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 TLR3O15455 904 aaKnown RBP17.64■□□□□ 0.41
LRFN3-203ENST00000587257 ACRP10323 421 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 IGFBP4P22692 258 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 ZNF365Q70YC5 407 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 ZNF467Q7Z7K2 595 aaPredicted RBP17.64■□□□□ 0.41
LRFN3-203ENST00000587257 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
LRFN3-203ENST00000587257 RAPGEFL1Q9UHV5 662 aa17.64■□□□□ 0.41
LRFN3-203ENST00000587257 SMIM22K7EJ46 135 aa17.63■□□□□ 0.41
LRFN3-203ENST00000587257 ACVR2BQ13705 512 aa17.63■□□□□ 0.41
LRFN3-203ENST00000587257 ADGRE1Q14246 886 aa17.63■□□□□ 0.41
LRFN3-203ENST00000587257 CCDC85BQ15834 202 aaPredicted RBP17.63■□□□□ 0.41
LRFN3-203ENST00000587257 FAM126BQ8IXS8 530 aa17.63■□□□□ 0.41
LRFN3-203ENST00000587257 RHPN1Q8TCX5 695 aa17.63■□□□□ 0.41
LRFN3-203ENST00000587257 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.63■□□□□ 0.41
LRFN3-203ENST00000587257 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
LRFN3-203ENST00000587257 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.63■□□□□ 0.41
LRFN3-203ENST00000587257 IFIT2P09913 472 aaKnown RBP17.62■□□□□ 0.41
LRFN3-203ENST00000587257 RLBP1P12271 317 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 ADD2P35612 726 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 PLA2G5P39877 138 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 IRX5P78411 483 aaPredicted RBP17.62■□□□□ 0.41
LRFN3-203ENST00000587257 GNASQ5JWF2 1037 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 HERVK_113Q902F9 699 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 NUP88Q99567 741 aaPredicted RBP17.62■□□□□ 0.41
LRFN3-203ENST00000587257 TSPYL2Q9H2G4 693 aaPredicted RBP17.62■□□□□ 0.41
LRFN3-203ENST00000587257 ABHD16BQ9H3Z7 469 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 SLC28A3Q9HAS3 691 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 IL23AQ9NPF7 189 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 RIPK3Q9Y572 518 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 PARP14Q460N5 1801 aa17.62■□□□□ 0.41
LRFN3-203ENST00000587257 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
LRFN3-203ENST00000587257 GJA9P57773 515 aa17.61■□□□□ 0.41
LRFN3-203ENST00000587257 CCDC144BQ3MJ40 725 aa17.61■□□□□ 0.41
LRFN3-203ENST00000587257 NKX2-4Q9H2Z4 354 aa17.61■□□□□ 0.41
LRFN3-203ENST00000587257 PAG1Q9NWQ8 432 aa17.61■□□□□ 0.41
LRFN3-203ENST00000587257 CTDP1Q9Y5B0 961 aaPredicted RBP17.61■□□□□ 0.41
LRFN3-203ENST00000587257 ATP2A1O14983 1001 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 ADCY6O43306 1168 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 CYP2C18P33260 490 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 CPXCR1Q8N123 301 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 ANKRD35Q8N283 1001 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 PRPF38AQ8NAV1 312 aaKnown RBP17.6■□□□□ 0.41
LRFN3-203ENST00000587257 FAM122AQ96E09 287 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
LRFN3-203ENST00000587257 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.6■□□□□ 0.41
LRFN3-203ENST00000587257 CXXC1Q9P0U4 656 aaPredicted RBP17.6■□□□□ 0.41
LRFN3-203ENST00000587257 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 ZBED4O75132 1171 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 NDUFB10O96000 172 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 FGBP02675 491 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
LRFN3-203ENST00000587257 ARMCX2Q7L311 632 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 HIPK3Q9H422 1215 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 ARPP21Q9UBL0 812 aaPredicted RBP17.59■□□□□ 0.41
LRFN3-203ENST00000587257 FBXO40Q9UH90 709 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 SLC4A4Q9Y6R1 1079 aa17.59■□□□□ 0.41
LRFN3-203ENST00000587257 PLXNA1Q9UIW2 1896 aa17.58■□□□□ 0.41
LRFN3-203ENST00000587257 COL11A1P12107 1806 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms