RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ADORA2AP29274 412 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 NOVP48745 357 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 SNRNP48Q6IEG0 339 aaKnown RBP17.44■□□□□ 0.38
ATG4D-207ENST00000587256 KCTD1Q719H9 257 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 RIOX2Q8IUF8 465 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 REPS2Q8NFH8 660 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
ATG4D-207ENST00000587256 STRNO43815 780 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
ATG4D-207ENST00000587256 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 TRIM32Q13049 653 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 TRDNQ13061 729 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 CCL14Q16627 93 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 CCDC178Q5BJE1 867 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 DPP9Q86TI2 863 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 CPXCR1Q8N123 301 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 CHURC1Q8WUH1 139 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 TTC14Q96N46 770 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 UBAC1Q9BSL1 405 aa17.43■□□□□ 0.38
ATG4D-207ENST00000587256 CDC45O75419 566 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 GJB1P08034 283 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 CYP21A2P08686 494 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 FCER1AP12319 257 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 KCTD2Q14681 263 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 RALYLQ86SE5 291 aaKnown RBP17.42■□□□□ 0.38
ATG4D-207ENST00000587256 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
ATG4D-207ENST00000587256 MMP19Q99542 508 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.42■□□□□ 0.38
ATG4D-207ENST00000587256 SLC38A10Q9HBR0 1119 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 RAVER2Q9HCJ3 691 aaKnown RBP17.42■□□□□ 0.38
ATG4D-207ENST00000587256 SLC5A4Q9NY91 659 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 RBM8AQ9Y5S9 174 aaKnown RBP17.42■□□□□ 0.38
ATG4D-207ENST00000587256 TNKSO95271 1327 aa17.42■□□□□ 0.38
ATG4D-207ENST00000587256 FRMPD2Q68DX3 1309 aaPredicted RBP17.42■□□□□ 0.38
ATG4D-207ENST00000587256 HOXC6P09630 235 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 FDX1P10109 184 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 MFSD14CQ5VZR4 134 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 DGKHQ86XP1 1220 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 ABRAQ8N0Z2 381 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
ATG4D-207ENST00000587256 DEFB118Q96PH6 123 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 KAT14Q9H8E8 782 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 HMX1Q9NP08 348 aaPredicted RBP17.41■□□□□ 0.38
ATG4D-207ENST00000587256 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
ATG4D-207ENST00000587256 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 GJA8P48165 433 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 OAZ1P54368 228 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 NPLOC4Q8TAT6 608 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 MAP4K1Q92918 833 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 SHISA4Q96DD7 197 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 PAK6Q9NQU5 681 aaPredicted RBP17.4■□□□□ 0.38
ATG4D-207ENST00000587256 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 RPTORQ8N122 1335 aa17.4■□□□□ 0.38
ATG4D-207ENST00000587256 BRCA2P51587 3418 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 PLA2G6O60733 806 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 PDHBP11177 359 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 MAP3K21Q5TCX8 1036 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 CCDC174Q6PII3 467 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 ENAHQ8N8S7 591 aaPredicted RBP17.39■□□□□ 0.37
ATG4D-207ENST00000587256 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 LSG1Q9H089 658 aaKnown RBP17.39■□□□□ 0.37
ATG4D-207ENST00000587256 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 FLRT1Q9NZU1 646 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 PRR12Q9ULL5 1215 aa17.39■□□□□ 0.37
ATG4D-207ENST00000587256 E7EWF7 191 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 COBLO75128 1261 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 PGK2P07205 417 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 SLC16A2P36021 539 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 CACNB2Q08289 660 aaPredicted RBP17.38■□□□□ 0.37
ATG4D-207ENST00000587256 ZNF543Q08ER8 600 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 IFIT1BQ5T764 474 aaKnown RBP17.38■□□□□ 0.37
ATG4D-207ENST00000587256 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 FBXO40Q9UH90 709 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 RIPK3Q9Y572 518 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 TAF6LQ9Y6J9 622 aa17.38■□□□□ 0.37
ATG4D-207ENST00000587256 SGPL1O95470 568 aa17.37■□□□□ 0.37
ATG4D-207ENST00000587256 CYP2C19P33261 490 aa17.37■□□□□ 0.37
ATG4D-207ENST00000587256 SNAP25P60880 206 aa17.37■□□□□ 0.37
ATG4D-207ENST00000587256 GPATCH4Q5T3I0 446 aaKnown RBP17.37■□□□□ 0.37
ATG4D-207ENST00000587256 OLFML2BQ68BL8 750 aa17.37■□□□□ 0.37
ATG4D-207ENST00000587256 TTBK2Q6IQ55 1244 aa17.37■□□□□ 0.37
ATG4D-207ENST00000587256 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
ATG4D-207ENST00000587256 DDX11Q96FC9 970 aa17.37■□□□□ 0.37
ATG4D-207ENST00000587256 ERICH2A1L162 156 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 FARP2O94887 1054 aaPredicted RBP17.36■□□□□ 0.37
ATG4D-207ENST00000587256 TFRCP02786 760 aaKnown RBP17.36■□□□□ 0.37
ATG4D-207ENST00000587256 GOLGA8HP0CJ92 632 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 SNHG28P0DPA3 235 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
ATG4D-207ENST00000587256 BTNL9Q6UXG8 535 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 STOX1Q6ZVD7 989 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms