RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 GOPCQ9HD26 462 aa18.01■□□□□ 0.47
SF3A2-202ENST00000586396 ECHDC1Q9NTX5 307 aa18.01■□□□□ 0.47
SF3A2-202ENST00000586396 GREB1LQ9C091 1923 aaPredicted RBP18.01■□□□□ 0.47
SF3A2-202ENST00000586396 GBF1Q92538 1859 aa18.01■□□□□ 0.47
SF3A2-202ENST00000586396 TRANK1O15050 2925 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 MOXD2PA6NHM9 499 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 TNFRSF10AO00220 468 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 VWA5AO00534 786 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 MBD4O95243 580 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 STAT3P40763 770 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 CCDC17Q96LX7 622 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 GAS2L1Q99501 681 aaPredicted RBP18■□□□□ 0.47
SF3A2-202ENST00000586396 TSEN34Q9BSV6 310 aaKnown RBP18■□□□□ 0.47
SF3A2-202ENST00000586396 ATP8A2Q9NTI2 1148 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 ZNF214Q9UL59 606 aaPredicted RBP18■□□□□ 0.47
SF3A2-202ENST00000586396 PPP1R9AQ9ULJ8 1098 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 ADAMTS5Q9UNA0 930 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 PCDHB15Q9Y5E8 787 aa18■□□□□ 0.47
SF3A2-202ENST00000586396 MROH7Q68CQ1 1323 aa17.99■□□□□ 0.47
SF3A2-202ENST00000586396 MYO9BQ13459 2157 aa17.99■□□□□ 0.47
SF3A2-202ENST00000586396 APBB1O00213 710 aa17.99■□□□□ 0.47
SF3A2-202ENST00000586396 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
SF3A2-202ENST00000586396 CDK8P49336 464 aa17.99■□□□□ 0.47
SF3A2-202ENST00000586396 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.471e-7■■■□□ 15.5
SF3A2-202ENST00000586396 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.99■□□□□ 0.476e-7■■■□□ 14.7
SF3A2-202ENST00000586396 BOLA2Q9H3K6 86 aa17.99■□□□□ 0.47
SF3A2-202ENST00000586396 ZHX1Q9UKY1 873 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-202ENST00000586396 MYH4Q9Y623 1939 aa17.99■□□□□ 0.47
SF3A2-202ENST00000586396 TTC41PQ6P2S7 1318 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 SYNGAP1Q96PV0 1343 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 SALL3Q9BXA9 1300 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 NCOR1O75376 2440 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 CYP2D7A0A087X1C5 515 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 PRKAB2O43741 272 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 TIMP1P01033 207 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 FAM83BQ5T0W9 1011 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 CCDC174Q6PII3 467 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 CCDC129Q6ZRS4 1044 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 C16orf86Q6ZW13 317 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 DDRGK1Q96HY6 314 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 TBX21Q9UL17 535 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 FAM184BQ9ULE4 1060 aa17.98■□□□□ 0.47
SF3A2-202ENST00000586396 SMIM22K7EJ46 135 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 COL9A1P20849 921 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 PPIGQ13427 754 aaKnown RBP eCLIP17.97■□□□□ 0.472e-9■■□□□ 12.2
SF3A2-202ENST00000586396 KCNA10Q16322 511 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 C12orf60Q5U649 245 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 SNRNP48Q6IEG0 339 aaKnown RBP17.97■□□□□ 0.47
SF3A2-202ENST00000586396 MFSD5Q6N075 450 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 ZSCAN25Q6NSZ9 544 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
SF3A2-202ENST00000586396 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 REPS2Q8NFH8 660 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 PPM1EQ8WY54 764 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 GLT1D1Q96MS3 346 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 TEX13BQ9BXU2 312 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 KANSL2Q9H9L4 492 aa17.97■□□□□ 0.47
SF3A2-202ENST00000586396 C6orf222P0C671 652 aaPredicted RBP17.96■□□□□ 0.47
SF3A2-202ENST00000586396 HDAC1Q13547 482 aaPredicted RBP17.96■□□□□ 0.47
SF3A2-202ENST00000586396 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.47
SF3A2-202ENST00000586396 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
SF3A2-202ENST00000586396 PBX4Q9BYU1 374 aa17.96■□□□□ 0.47
SF3A2-202ENST00000586396 MYADML2A6NDP7 307 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 USP17L12C9JPN9 530 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 USP17L21D6R901 530 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 SMARCA5O60264 1052 aaPredicted RBP17.95■□□□□ 0.46
SF3A2-202ENST00000586396 SLFNL1Q499Z3 407 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 PSRC1Q6PGN9 363 aaPredicted RBP17.95■□□□□ 0.46
SF3A2-202ENST00000586396 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 SLF1Q9BQI6 1058 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 SPC25Q9HBM1 224 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 THEGQ9P2T0 379 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 ELP1O95163 1332 aa17.95■□□□□ 0.46
SF3A2-202ENST00000586396 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
SF3A2-202ENST00000586396 CSF2RAP15509 400 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 CST5P28325 142 aaPredicted RBP17.94■□□□□ 0.46
SF3A2-202ENST00000586396 PBX2P40425 430 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 TMEM240Q5SV17 173 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 CCSAPQ6IQ19 270 aaPredicted RBP17.94■□□□□ 0.46
SF3A2-202ENST00000586396 GIMAP6Q6P9H5 292 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 TICAM2Q86XR7 235 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 TMEM199Q8N511 208 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 PCSK9Q8NBP7 692 aaKnown RBP17.94■□□□□ 0.46
SF3A2-202ENST00000586396 PI4K2BQ8TCG2 481 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 ATXN2LQ8WWM7 1075 aaKnown RBP17.94■□□□□ 0.46
SF3A2-202ENST00000586396 VTI1AQ96AJ9 217 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 NUP88Q99567 741 aaPredicted RBP17.94■□□□□ 0.46
SF3A2-202ENST00000586396 PPP1R12CQ9BZL4 782 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 PRDM12Q9H4Q4 367 aa17.94■□□□□ 0.46
SF3A2-202ENST00000586396 LRRC37A2A6NM11 1700 aa17.93■□□□□ 0.46
SF3A2-202ENST00000586396 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
SF3A2-202ENST00000586396 GRXCR1A8MXD5 290 aa17.93■□□□□ 0.46
SF3A2-202ENST00000586396 SNAI1O95863 264 aaPredicted RBP17.93■□□□□ 0.46
SF3A2-202ENST00000586396 ASGR1P07306 291 aa17.93■□□□□ 0.46
SF3A2-202ENST00000586396 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
SF3A2-202ENST00000586396 SLC4A3P48751 1232 aa17.93■□□□□ 0.46
SF3A2-202ENST00000586396 MAMDC4Q6UXC1 1216 aa17.93■□□□□ 0.46
SF3A2-202ENST00000586396 CTDP1Q9Y5B0 961 aaPredicted RBP17.93■□□□□ 0.46
SF3A2-202ENST00000586396 SLC4A4Q9Y6R1 1079 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms