RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 SBK1Q52WX2 424 aa23.45■■□□□ 1.34
PTBP1-208ENST00000585956 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.45■■□□□ 1.349e-10■□□□□ 8.5
PTBP1-208ENST00000585956 SEMA6BQ9H3T3 888 aa23.45■■□□□ 1.34
PTBP1-208ENST00000585956 ARPP21Q9UBL0 812 aaPredicted RBP23.45■■□□□ 1.34
PTBP1-208ENST00000585956 CHD9Q3L8U1 2897 aa23.45■■□□□ 1.34
PTBP1-208ENST00000585956 SYNRGQ9UMZ2 1314 aa23.44■■□□□ 1.34
PTBP1-208ENST00000585956 F5H6K3 240 aa23.44■■□□□ 1.34
PTBP1-208ENST00000585956 KLRC3Q07444 240 aa23.44■■□□□ 1.34
PTBP1-208ENST00000585956 ZNF697Q5TEC3 545 aa23.44■■□□□ 1.34
PTBP1-208ENST00000585956 SNRNP48Q6IEG0 339 aaKnown RBP23.44■■□□□ 1.34
PTBP1-208ENST00000585956 SLF1Q9BQI6 1058 aa23.44■■□□□ 1.34
PTBP1-208ENST00000585956 NRBP1Q9UHY1 535 aa23.44■■□□□ 1.34
PTBP1-208ENST00000585956 RCAN3Q9UKA8 241 aa23.44■■□□□ 1.34
PTBP1-208ENST00000585956 DIS3Q9Y2L1 958 aaKnown RBP23.44■■□□□ 1.34
PTBP1-208ENST00000585956 DNAJC25-GNG10A0A024R161 153 aa23.43■■□□□ 1.34
PTBP1-208ENST00000585956 MINDY4BA8MYZ0 360 aa23.43■■□□□ 1.34
PTBP1-208ENST00000585956 PQBP1O60828 265 aaKnown RBP23.43■■□□□ 1.34
PTBP1-208ENST00000585956 CCSAPQ6IQ19 270 aaPredicted RBP23.43■■□□□ 1.34
PTBP1-208ENST00000585956 AMOTL1Q8IY63 956 aa23.43■■□□□ 1.34
PTBP1-208ENST00000585956 ECHDC1Q9NTX5 307 aa23.43■■□□□ 1.34
PTBP1-208ENST00000585956 CLTBP09497 229 aa23.42■■□□□ 1.34
PTBP1-208ENST00000585956 SLC4A3P48751 1232 aa23.42■■□□□ 1.34
PTBP1-208ENST00000585956 KBTBD3Q8NAB2 608 aa23.42■■□□□ 1.34
PTBP1-208ENST00000585956 MYLIPQ8WY64 445 aa23.42■■□□□ 1.34
PTBP1-208ENST00000585956 SEC62Q99442 399 aaKnown RBP23.42■■□□□ 1.34
PTBP1-208ENST00000585956 RAVER2Q9HCJ3 691 aaKnown RBP23.42■■□□□ 1.34
PTBP1-208ENST00000585956 NYAP2Q9P242 653 aa23.42■■□□□ 1.34
PTBP1-208ENST00000585956 CLIP2Q9UDT6 1046 aa23.42■■□□□ 1.34
PTBP1-208ENST00000585956 KIAA0355O15063 1070 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 AKR1A1P14550 325 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 PTGS1P23219 599 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 FAAP100Q0VG06 881 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 CPXCR1Q8N123 301 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 LRRC47Q8N1G4 583 aaKnown RBP23.41■■□□□ 1.34
PTBP1-208ENST00000585956 KLHDC9Q8NEP7 349 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 DDRGK1Q96HY6 314 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 TEX13BQ9BXU2 312 aa23.41■■□□□ 1.34
PTBP1-208ENST00000585956 DDX49Q9Y6V7 483 aaKnown RBP23.41■■□□□ 1.34
PTBP1-208ENST00000585956 GPAA1O43292 621 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 ZSCAN25Q6NSZ9 544 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 RASGRP2Q7LDG7 609 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 RNF180Q86T96 592 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 OTUD7AQ8TE49 926 aaPredicted RBP23.4■■□□□ 1.34
PTBP1-208ENST00000585956 APPBP2Q92624 585 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 CHMP4CQ96CF2 233 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 CEP95Q96GE4 821 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 CHD7Q9P2D1 2997 aa23.4■■□□□ 1.34
PTBP1-208ENST00000585956 ACLYP53396 1101 aa23.39■■□□□ 1.33
PTBP1-208ENST00000585956 MKNK2Q9HBH9 465 aa23.39■■□□□ 1.33
PTBP1-208ENST00000585956 ZHX1Q9UKY1 873 aaPredicted RBP23.39■■□□□ 1.33
PTBP1-208ENST00000585956 RNF113AO15541 343 aaKnown RBP23.38■■□□□ 1.33
PTBP1-208ENST00000585956 SMAD3P84022 425 aaKnown RBP23.38■■□□□ 1.33
PTBP1-208ENST00000585956 KCNA10Q16322 511 aa23.38■■□□□ 1.33
PTBP1-208ENST00000585956 MAMDC4Q6UXC1 1216 aa23.38■■□□□ 1.33
PTBP1-208ENST00000585956 KIFC2Q96AC6 838 aa23.38■■□□□ 1.33
PTBP1-208ENST00000585956 KATNBL1Q9H079 304 aa23.38■■□□□ 1.33
PTBP1-208ENST00000585956 SLC38A10Q9HBR0 1119 aa23.38■■□□□ 1.33
PTBP1-208ENST00000585956 TACC3Q9Y6A5 838 aa23.38■■□□□ 1.33
PTBP1-208ENST00000585956 REV3LO60673 3130 aa23.38■■□□□ 1.33
PTBP1-208ENST00000585956 SYNGAP1Q96PV0 1343 aa23.37■■□□□ 1.33
PTBP1-208ENST00000585956 CTAGE5O15320 804 aa23.37■■□□□ 1.33
PTBP1-208ENST00000585956 FOXP2O15409 715 aa23.37■■□□□ 1.33
PTBP1-208ENST00000585956 GIMAP6Q6P9H5 292 aa23.37■■□□□ 1.33
PTBP1-208ENST00000585956 DCTPP1Q9H773 170 aa23.37■■□□□ 1.33
PTBP1-208ENST00000585956 MTMR4Q9NYA4 1195 aa23.37■■□□□ 1.33
PTBP1-208ENST00000585956 CNPY2Q9Y2B0 182 aa23.37■■□□□ 1.33
PTBP1-208ENST00000585956 ATP2A1O14983 1001 aa23.36■■□□□ 1.33
PTBP1-208ENST00000585956 CNTN2Q02246 1040 aa23.36■■□□□ 1.33
PTBP1-208ENST00000585956 ANKRD33Q7Z3H0 272 aa23.36■■□□□ 1.33
PTBP1-208ENST00000585956 PRPF38AQ8NAV1 312 aaKnown RBP23.36■■□□□ 1.33
PTBP1-208ENST00000585956 MAFAQ8NHW3 353 aaPredicted RBP23.36■■□□□ 1.33
PTBP1-208ENST00000585956 RNPC3Q96LT9 517 aaKnown RBP23.36■■□□□ 1.33
PTBP1-208ENST00000585956 INCENPQ9NQS7 918 aa23.36■■□□□ 1.33
PTBP1-208ENST00000585956 TMEM39AQ9NV64 488 aa23.36■■□□□ 1.33
PTBP1-208ENST00000585956 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.36■■□□□ 1.33
PTBP1-208ENST00000585956 LRRC37A2A6NM11 1700 aa23.36■■□□□ 1.33
PTBP1-208ENST00000585956 RAG1P15918 1043 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 COPB2P35606 906 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 ACVR2BQ13705 512 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.35■■□□□ 1.335e-8■■□□□ 14.1
PTBP1-208ENST00000585956 C16orf59Q7L2K0 433 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 MKL1Q969V6 931 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 DDX11Q96FC9 970 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 STARD7Q9NQZ5 370 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 HOMER2Q9NSB8 354 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 TBX21Q9UL17 535 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 FAM184BQ9ULE4 1060 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 LCTP09848 1927 aa23.35■■□□□ 1.33
PTBP1-208ENST00000585956 ASTN1O14525 1302 aa23.34■■□□□ 1.33
PTBP1-208ENST00000585956 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.34■■□□□ 1.33
PTBP1-208ENST00000585956 TDO2P48775 406 aa23.34■■□□□ 1.33
PTBP1-208ENST00000585956 SNAP25P60880 206 aa23.34■■□□□ 1.33
PTBP1-208ENST00000585956 CCDC144BQ3MJ40 725 aa23.34■■□□□ 1.33
PTBP1-208ENST00000585956 IFNL3Q8IZI9 196 aa23.34■■□□□ 1.33
PTBP1-208ENST00000585956 PI4K2BQ8TCG2 481 aa23.34■■□□□ 1.33
PTBP1-208ENST00000585956 TSEN34Q9BSV6 310 aaKnown RBP23.34■■□□□ 1.33
PTBP1-208ENST00000585956 ZNF536O15090 1300 aa23.33■■□□□ 1.33
PTBP1-208ENST00000585956 PLIN4Q96Q06 1357 aa23.33■■□□□ 1.33
PTBP1-208ENST00000585956 DUSP11O75319 330 aaKnown RBP23.33■■□□□ 1.33
PTBP1-208ENST00000585956 FPGSQ05932 587 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms