RNA–Protein interactions for RNA: ENST00000585735.1

GHDC-205, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 940 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-205ENST00000585735 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.82■■□□□ 1.4
GHDC-205ENST00000585735 TMTC3Q6ZXV5 915 aa23.82■■□□□ 1.4
GHDC-205ENST00000585735 UBE2Q1Q7Z7E8 422 aa23.82■■□□□ 1.4
GHDC-205ENST00000585735 ALG1Q9BT22 464 aa23.82■■□□□ 1.4
GHDC-205ENST00000585735 FAM196BA6NMK8 535 aa23.81■■□□□ 1.4
GHDC-205ENST00000585735 MPHOSPH10O00566 681 aaKnown RBP23.81■■□□□ 1.4
GHDC-205ENST00000585735 SLURP2P0DP57 97 aa23.81■■□□□ 1.4
GHDC-205ENST00000585735 GTF2A2P52657 109 aa23.81■■□□□ 1.4
GHDC-205ENST00000585735 LACTBP83111 547 aaPredicted RBP23.81■■□□□ 1.4
GHDC-205ENST00000585735 TLR2O60603 784 aa23.8■■□□□ 1.4
GHDC-205ENST00000585735 DEXIO95424 95 aa23.8■■□□□ 1.4
GHDC-205ENST00000585735 GNAQP50148 359 aa23.8■■□□□ 1.4
GHDC-205ENST00000585735 AKAP17AQ02040 695 aaKnown RBP23.8■■□□□ 1.4
GHDC-205ENST00000585735 TNFAIP1Q13829 316 aa23.8■■□□□ 1.4
GHDC-205ENST00000585735 FERMT3Q86UX7 667 aa23.8■■□□□ 1.4
GHDC-205ENST00000585735 RNF26Q9BY78 433 aaPredicted RBP23.8■■□□□ 1.4
GHDC-205ENST00000585735 ZSCAN16Q9H4T2 348 aaPredicted RBP23.8■■□□□ 1.4
GHDC-205ENST00000585735 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.8■■□□□ 1.4
GHDC-205ENST00000585735 PRPF3O43395 683 aaKnown RBP23.79■■□□□ 1.4
GHDC-205ENST00000585735 PLEKHA8P1O95397 391 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 TTLL1O95922 423 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 GNRH1P01148 92 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 FUT2Q10981 343 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 RESTQ13127 1097 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 KIF22Q14807 665 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 CMTR1Q8N1G2 835 aaKnown RBP23.79■■□□□ 1.4
GHDC-205ENST00000585735 FBXO18Q8NFZ0 1043 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 TMEM39BQ9GZU3 492 aa23.79■■□□□ 1.4
GHDC-205ENST00000585735 GREB1LQ9C091 1923 aaPredicted RBP23.78■■□□□ 1.4
GHDC-205ENST00000585735 SOX1O00570 391 aaPredicted RBP23.78■■□□□ 1.4
GHDC-205ENST00000585735 TBC1D12O60347 775 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 MNX1P50219 401 aaPredicted RBP23.78■■□□□ 1.4
GHDC-205ENST00000585735 PRMT2P55345 433 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 GUCY1B3Q02153 619 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 ABCB5Q2M3G0 1257 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 FOXD4L6Q3SYB3 417 aaPredicted RBP23.78■■□□□ 1.4
GHDC-205ENST00000585735 FOXD4L3Q6VB84 417 aaPredicted RBP23.78■■□□□ 1.4
GHDC-205ENST00000585735 TMEM179Q6ZVK1 233 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 CCDC82Q8N4S0 544 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 CHAMP1Q96JM3 812 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 HTATIP2Q9BUP3 242 aa23.78■■□□□ 1.4
GHDC-205ENST00000585735 LAMA3Q16787 3333 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 TRIM29Q14134 588 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 VGLL4Q14135 290 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 CDAN1Q8IWY9 1227 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 SRBD1Q8N5C6 995 aaKnown RBP23.77■■□□□ 1.4
GHDC-205ENST00000585735 TEPSINQ96N21 525 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 AIFM3Q96NN9 605 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 LZTS2Q9BRK4 669 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 KANSL2Q9H9L4 492 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 CLIP2Q9UDT6 1046 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 MGAMO43451 1857 aa23.77■■□□□ 1.4
GHDC-205ENST00000585735 A0A1W2PPC1 479 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 GJA8P48165 433 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 MAP3K9P80192 1104 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 LRCH3Q96II8 777 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 CABP5Q9NP86 173 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 MAD2L2Q9UI95 211 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 NR2E3Q9Y5X4 410 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 CNTNAP5Q8WYK1 1306 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 ALPK3Q96L96 1907 aa23.76■■□□□ 1.39
GHDC-205ENST00000585735 PALM3A6NDB9 673 aaPredicted RBP23.75■■□□□ 1.39
GHDC-205ENST00000585735 PARP1P09874 1014 aaKnown RBP23.75■■□□□ 1.39
GHDC-205ENST00000585735 CTGFP29279 349 aa23.75■■□□□ 1.39
GHDC-205ENST00000585735 GUCY1A2P33402 732 aa23.75■■□□□ 1.39
GHDC-205ENST00000585735 KRT40Q6A162 431 aa23.75■■□□□ 1.39
GHDC-205ENST00000585735 NYAP2Q9P242 653 aa23.75■■□□□ 1.39
GHDC-205ENST00000585735 V9GY48 417 aaPredicted RBP23.75■■□□□ 1.39
GHDC-205ENST00000585735 GDF11O95390 407 aa23.74■■□□□ 1.39
GHDC-205ENST00000585735 GJB1P08034 283 aa23.74■■□□□ 1.39
GHDC-205ENST00000585735 MAP3K10Q02779 954 aa23.74■■□□□ 1.39
GHDC-205ENST00000585735 DNM1Q05193 864 aaKnown RBP23.74■■□□□ 1.39
GHDC-205ENST00000585735 CLEC10AQ8IUN9 316 aa23.74■■□□□ 1.39
GHDC-205ENST00000585735 LRRC47Q8N1G4 583 aaKnown RBP23.74■■□□□ 1.39
GHDC-205ENST00000585735 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.74■■□□□ 1.391e-6■■■■■ 29.6
GHDC-205ENST00000585735 ZCCHC17Q9NP64 241 aaKnown RBP23.74■■□□□ 1.39
GHDC-205ENST00000585735 MTMR7Q9Y216 660 aa23.74■■□□□ 1.39
GHDC-205ENST00000585735 CNPY2Q9Y2B0 182 aa23.74■■□□□ 1.39
GHDC-205ENST00000585735 BTBD19C9JJ37 291 aa23.73■■□□□ 1.39
GHDC-205ENST00000585735 ATP2B2Q01814 1243 aa23.73■■□□□ 1.39
GHDC-205ENST00000585735 RRP1BQ14684 758 aaKnown RBP23.73■■□□□ 1.39
GHDC-205ENST00000585735 SEPT2Q15019 361 aa23.73■■□□□ 1.39
GHDC-205ENST00000585735 STAG2Q8N3U4 1231 aa23.73■■□□□ 1.39
GHDC-205ENST00000585735 MKL1Q969V6 931 aa23.73■■□□□ 1.39
GHDC-205ENST00000585735 GJB4Q9NTQ9 266 aa23.73■■□□□ 1.39
GHDC-205ENST00000585735 LMBRD1Q9NUN5 540 aa23.73■■□□□ 1.39
GHDC-205ENST00000585735 USP17L5A8MUK1 530 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 PRPF40AO75400 957 aaKnown RBP23.72■■□□□ 1.39
GHDC-205ENST00000585735 ECM2O94769 699 aaPredicted RBP23.72■■□□□ 1.39
GHDC-205ENST00000585735 GH2P01242 217 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 EEF2P13639 858 aaKnown RBP23.72■■□□□ 1.39
GHDC-205ENST00000585735 NCLP19338 710 aaKnown RBP23.72■■□□□ 1.39
GHDC-205ENST00000585735 SMARCA1P28370 1054 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 KRT85P78386 507 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 PKN1Q16512 942 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 CSPP1Q1MSJ5 1256 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 SKOR2Q2VWA4 1001 aaPredicted RBP23.72■■□□□ 1.39
GHDC-205ENST00000585735 TMEM87AQ8NBN3 555 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 SRRDQ9UH36 339 aa23.72■■□□□ 1.39
GHDC-205ENST00000585735 CSADQ9Y600 493 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms