RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 A0A1W2PQ45 241 aaPredicted RBP17.33■□□□□ 0.36
SDF2-202ENST00000585428 A0A1W2PQY0 241 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 RAD21O60216 631 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 EPHB4P54760 987 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 ANKRD33Q7Z3H0 272 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.33■□□□□ 0.36
SDF2-202ENST00000585428 KBTBD3Q8NAB2 608 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 KLHDC9Q8NEP7 349 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 TOX2Q96NM4 488 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 COL25A1Q9BXS0 654 aaPredicted RBP17.33■□□□□ 0.36
SDF2-202ENST00000585428 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 CLIP2Q9UDT6 1046 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.36
SDF2-202ENST00000585428 ROBO3Q96MS0 1386 aa17.32■□□□□ 0.36
SDF2-202ENST00000585428 SYNGAP1Q96PV0 1343 aa17.32■□□□□ 0.36
SDF2-202ENST00000585428 NDUFB10O96000 172 aa17.32■□□□□ 0.36
SDF2-202ENST00000585428 CLTBP09497 229 aa17.32■□□□□ 0.36
SDF2-202ENST00000585428 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
SDF2-202ENST00000585428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.32■□□□□ 0.36
SDF2-202ENST00000585428 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
SDF2-202ENST00000585428 TTYH1Q9H313 450 aaPredicted RBP17.32■□□□□ 0.36
SDF2-202ENST00000585428 DCTPP1Q9H773 170 aa17.32■□□□□ 0.36
SDF2-202ENST00000585428 FAM184BQ9ULE4 1060 aa17.32■□□□□ 0.36
SDF2-202ENST00000585428 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
SDF2-202ENST00000585428 MINDY4BA8MYZ0 360 aa17.31■□□□□ 0.36
SDF2-202ENST00000585428 RNF113AO15541 343 aaKnown RBP17.31■□□□□ 0.36
SDF2-202ENST00000585428 ACLYP53396 1101 aa17.31■□□□□ 0.36
SDF2-202ENST00000585428 KCNA10Q16322 511 aa17.31■□□□□ 0.36
SDF2-202ENST00000585428 SNRNP48Q6IEG0 339 aaKnown RBP17.31■□□□□ 0.36
SDF2-202ENST00000585428 STK11IPQ8N1F8 1099 aa17.31■□□□□ 0.36
SDF2-202ENST00000585428 APPBP2Q92624 585 aa17.31■□□□□ 0.36
SDF2-202ENST00000585428 LENG1Q96BZ8 264 aaPredicted RBP17.31■□□□□ 0.36
SDF2-202ENST00000585428 DDX11Q96FC9 970 aa17.31■□□□□ 0.36
SDF2-202ENST00000585428 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
SDF2-202ENST00000585428 ZBED4O75132 1171 aa17.3■□□□□ 0.36
SDF2-202ENST00000585428 DUSP11O75319 330 aaKnown RBP17.3■□□□□ 0.36
SDF2-202ENST00000585428 ZNF444Q8N0Y2 327 aaPredicted RBP17.3■□□□□ 0.36
SDF2-202ENST00000585428 NUP133Q8WUM0 1156 aa17.3■□□□□ 0.36
SDF2-202ENST00000585428 SLC38A10Q9HBR0 1119 aa17.3■□□□□ 0.36
SDF2-202ENST00000585428 TMEM39AQ9NV64 488 aa17.3■□□□□ 0.36
SDF2-202ENST00000585428 MTMR4Q9NYA4 1195 aa17.3■□□□□ 0.36
SDF2-202ENST00000585428 SYNPO2Q9UMS6 1093 aa17.3■□□□□ 0.36
SDF2-202ENST00000585428 LTBP2Q14767 1821 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 MOXD2PA6NHM9 499 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 PQBP1O60828 265 aaKnown RBP17.29■□□□□ 0.36
SDF2-202ENST00000585428 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
SDF2-202ENST00000585428 RAG1P15918 1043 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 GNAT2P19087 354 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 CDK7P50613 346 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 CPXCR1Q8N123 301 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 FGD4Q96M96 766 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
SDF2-202ENST00000585428 FEM1BQ9UK73 627 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
SDF2-202ENST00000585428 ZNFX1Q9P2E3 1918 aaKnown RBP17.29■□□□□ 0.36
SDF2-202ENST00000585428 BAZ2AQ9UIF9 1905 aaKnown RBP17.29■□□□□ 0.36
SDF2-202ENST00000585428 SYNRGQ9UMZ2 1314 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 DCDC2CA8MYV0 355 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 GPAA1O43292 621 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 CST5P28325 142 aaPredicted RBP17.28■□□□□ 0.36
SDF2-202ENST00000585428 ACVR2BQ13705 512 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 GMCL1P1Q8NEA9 526 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 ZNF287Q9HBT7 754 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 RAVER2Q9HCJ3 691 aaKnown RBP17.28■□□□□ 0.36
SDF2-202ENST00000585428 STARD7Q9NQZ5 370 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
SDF2-202ENST00000585428 ELP1O95163 1332 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 M0R2C6 588 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 ADCY6O43306 1168 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 PRDM1O75626 825 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 TTLL1O95922 423 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 TIMP1P01033 207 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 OAZ1P54368 228 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 NKX3-2P78367 333 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
SDF2-202ENST00000585428 FPGSQ05932 587 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 CHST13Q8NET6 341 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 NEDD1Q8NHV4 660 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 KIFC2Q96AC6 838 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 RNPC3Q96LT9 517 aaKnown RBP17.27■□□□□ 0.36
SDF2-202ENST00000585428 ABHD16BQ9H3Z7 469 aa17.27■□□□□ 0.36
SDF2-202ENST00000585428 PRUNE2Q8WUY3 3088 aa17.27■□□□□ 0.35
SDF2-202ENST00000585428 TMEM265A0A087WTH1 108 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.26■□□□□ 0.35
SDF2-202ENST00000585428 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.26■□□□□ 0.35
SDF2-202ENST00000585428 MYADML2A6NDP7 307 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 APPP05067 770 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 GJA9P57773 515 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 CCDC144BQ3MJ40 725 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 C16orf59Q7L2K0 433 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 ANKRD35Q8N283 1001 aa17.26■□□□□ 0.35
SDF2-202ENST00000585428 MAFAQ8NHW3 353 aaPredicted RBP17.26■□□□□ 0.35
SDF2-202ENST00000585428 MYLIPQ8WY64 445 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms