RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 SHTN1A0MZ66 631 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 KHNYNO15037 678 aaKnown RBP6.91□□□□□ -1.3
CDH8-213ENST00000584966 COBLO75128 1261 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 ARID4AP29374 1257 aaPredicted RBP6.91□□□□□ -1.3
CDH8-213ENST00000584966 PLA2G4AP47712 749 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 SCNN1DP51172 638 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 PTK7Q13308 1070 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 OS9Q13438 667 aaPredicted RBP6.91□□□□□ -1.3
CDH8-213ENST00000584966 NCOA4Q13772 614 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 GRIK5Q16478 980 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 STRIP1Q5VSL9 837 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 CIAPIN1Q6FI81 312 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 GPC2Q8N158 579 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 PLPP7Q8NBV4 271 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 GCC1Q96CN9 775 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 ZNF512BQ96KM6 892 aaPredicted RBP6.91□□□□□ -1.3
CDH8-213ENST00000584966 NEUROD6Q96NK8 337 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 RWDD1Q9H446 243 aaPredicted RBP6.91□□□□□ -1.3
CDH8-213ENST00000584966 PRR12Q9ULL5 1215 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 IQSEC3Q9UPP2 1182 aaPredicted RBP6.91□□□□□ -1.3
CDH8-213ENST00000584966 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
CDH8-213ENST00000584966 MAST2Q6P0Q8 1798 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 TRPM7Q96QT4 1865 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 YY1P25490 414 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 MCAMP43121 646 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 GMPSP49915 693 aaPredicted RBP6.9□□□□□ -1.3
CDH8-213ENST00000584966 EIF6P56537 245 aaKnown RBP6.9□□□□□ -1.3
CDH8-213ENST00000584966 FKBP1AP62942 108 aaKnown RBP6.9□□□□□ -1.3
CDH8-213ENST00000584966 GTF2IP78347 998 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 TNP2Q05952 138 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 GRIK4Q16099 956 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 MAP7D1Q3KQU3 841 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 CAVIN4Q5BKX8 364 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 TTLL5Q6EMB2 1281 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 PHLDB3Q6NSJ2 640 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 ZNF804AQ7Z570 1209 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 AACSQ86V21 672 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 OTUD7AQ8TE49 926 aaPredicted RBP6.9□□□□□ -1.3
CDH8-213ENST00000584966 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
CDH8-213ENST00000584966 LRRCC1Q9C099 1032 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 HMG20BQ9P0W2 317 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 JAG2Q9Y219 1238 aa6.9□□□□□ -1.3
CDH8-213ENST00000584966 EGFRP00533 1210 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 MYCP01106 439 aaPredicted RBP6.89□□□□□ -1.31
CDH8-213ENST00000584966 EPS15P42566 896 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
CDH8-213ENST00000584966 NUCB1Q02818 461 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 RASGRF1Q13972 1273 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 TNIP1Q15025 636 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 ANKRD45Q5TZF3 282 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 ZNF468Q5VIY5 522 aaPredicted RBP6.89□□□□□ -1.31
CDH8-213ENST00000584966 PI16Q6UXB8 463 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 NLRP8Q86W28 1048 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 CLASRPQ8N2M8 674 aaKnown RBP6.89□□□□□ -1.31
CDH8-213ENST00000584966 AGBL3Q8NEM8 1001 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 ZNF384Q8TF68 577 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 DPF2Q92785 391 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 ZBED3Q96IU2 234 aaPredicted RBP6.89□□□□□ -1.31
CDH8-213ENST00000584966 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 NMRK2Q9NPI5 230 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 GPRC5DQ9NZD1 345 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 GJA3Q9Y6H8 435 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 PDS5AQ29RF7 1337 aaKnown RBP6.89□□□□□ -1.31
CDH8-213ENST00000584966 SALL1Q9NSC2 1324 aa6.89□□□□□ -1.31
CDH8-213ENST00000584966 PCNTO95613 3336 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 ELOA3CA0A087WX78 387 aaPredicted RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 ELOA3DA6NLF2 546 aaPredicted RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 STAU1O95793 577 aaKnown RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 CYP2E1P05181 493 aaPredicted RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 H2AFB1P0C5Y9 115 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 H2AFB2P0C5Z0 115 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 ATP4AP20648 1035 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 RASA1P20936 1047 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 ALAS2P22557 587 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 RPS12P25398 132 aaKnown RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 ELOA3BQ3SY89 546 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 ERICH6BQ5W0A0 696 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 MCTP1Q6DN14 999 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 SPATA5Q8NB90 893 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 ELOA3Q8NG57 546 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH8-213ENST00000584966 CLP1Q92989 425 aaKnown RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 AIDAQ96BJ3 306 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 CNOT7Q9UIV1 285 aaKnown RBP6.88□□□□□ -1.31
CDH8-213ENST00000584966 DENND2AQ9ULE3 1009 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 PCDHAC2Q9Y5I4 1007 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 MYH1P12882 1939 aa6.88□□□□□ -1.31
CDH8-213ENST00000584966 AOX1Q06278 1338 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 IFIT2P09913 472 aaKnown RBP6.87□□□□□ -1.31
CDH8-213ENST00000584966 UQCRFS1P1P0C7P4 283 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 ATP5JP18859 108 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 ZAP70P43403 619 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 CHAF1AQ13111 956 aaPredicted RBP6.87□□□□□ -1.31
CDH8-213ENST00000584966 TLR1Q15399 786 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 EML3Q32P44 896 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 CCDC158Q5M9N0 1113 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 MFSD14BQ5SR56 506 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms