RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 KLRC3Q07444 240 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 C20orf194Q5TEA3 1177 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 RNF180Q86T96 592 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 OSBP2Q969R2 916 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 SLF1Q9BQI6 1058 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 NYAP2Q9P242 653 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 MYH4Q9Y623 1939 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 IGKV6D-41A0A0C4DH26 115 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 NDUFB10O96000 172 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 COPB2P35606 906 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 SNRNP48Q6IEG0 339 aaKnown RBP16.14■□□□□ 0.17
CCDC57-218ENST00000583593 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 TEX13BQ9BXU2 312 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 ECHDC1Q9NTX5 307 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
CCDC57-218ENST00000583593 MINDY4BA8MYZ0 360 aa16.13■□□□□ 0.17
CCDC57-218ENST00000583593 PQBP1O60828 265 aaKnown RBP16.13■□□□□ 0.17
CCDC57-218ENST00000583593 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
CCDC57-218ENST00000583593 FAAP100Q0VG06 881 aa16.13■□□□□ 0.17
CCDC57-218ENST00000583593 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
CCDC57-218ENST00000583593 CCSAPQ6IQ19 270 aaPredicted RBP16.13■□□□□ 0.17
CCDC57-218ENST00000583593 GIMAP6Q6P9H5 292 aa16.13■□□□□ 0.17
CCDC57-218ENST00000583593 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
CCDC57-218ENST00000583593 KBTBD3Q8NAB2 608 aa16.13■□□□□ 0.17
CCDC57-218ENST00000583593 FGD4Q96M96 766 aa16.13■□□□□ 0.17
CCDC57-218ENST00000583593 TSEN34Q9BSV6 310 aaKnown RBP16.13■□□□□ 0.17
CCDC57-218ENST00000583593 EPB41L4AQ9HCS5 686 aaPredicted RBP16.13■□□□□ 0.17
CCDC57-218ENST00000583593 SYNGAP1Q96PV0 1343 aa16.13■□□□□ 0.17
CCDC57-218ENST00000583593 MYADML2A6NDP7 307 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 ADCY6O43306 1168 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 ACLYP53396 1101 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC57-218ENST00000583593 ANKRD33Q7Z3H0 272 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
CCDC57-218ENST00000583593 MYLIPQ8WY64 445 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 APPBP2Q92624 585 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 MKL1Q969V6 931 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 TOX2Q96NM4 488 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
CCDC57-218ENST00000583593 MKNK2Q9HBH9 465 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 CLIP2Q9UDT6 1046 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 CNPY2Q9Y2B0 182 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 MCM3APO60318 1980 aa16.12■□□□□ 0.17
CCDC57-218ENST00000583593 RAG1P15918 1043 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 KCNA10Q16322 511 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 TSHZ3Q63HK5 1081 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 SLC38A10Q9HBR0 1119 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
CCDC57-218ENST00000583593 STARD7Q9NQZ5 370 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 TMEM39AQ9NV64 488 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
CCDC57-218ENST00000583593 MOXD2PA6NHM9 499 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 M0R2C6 588 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 RNF113AO15541 343 aaKnown RBP16.1■□□□□ 0.17
CCDC57-218ENST00000583593 GPAA1O43292 621 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
CCDC57-218ENST00000583593 PRDM1O75626 825 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 ACVR2BQ13705 512 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 ZNF467Q7Z7K2 595 aaPredicted RBP16.1■□□□□ 0.17
CCDC57-218ENST00000583593 MAFAQ8NHW3 353 aaPredicted RBP16.1■□□□□ 0.17
CCDC57-218ENST00000583593 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
CCDC57-218ENST00000583593 DCTPP1Q9H773 170 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
CCDC57-218ENST00000583593 ZHX1Q9UKY1 873 aaPredicted RBP16.1■□□□□ 0.17
CCDC57-218ENST00000583593 ZBED4O75132 1171 aa16.09■□□□□ 0.17
CCDC57-218ENST00000583593 CDK7P50613 346 aa16.09■□□□□ 0.17
CCDC57-218ENST00000583593 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
CCDC57-218ENST00000583593 KIFC2Q96AC6 838 aa16.09■□□□□ 0.17
CCDC57-218ENST00000583593 KATNBL1Q9H079 304 aa16.09■□□□□ 0.17
CCDC57-218ENST00000583593 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.09■□□□□ 0.17
CCDC57-218ENST00000583593 TIMP1P01033 207 aa16.08■□□□□ 0.16
CCDC57-218ENST00000583593 CST5P28325 142 aaPredicted RBP16.08■□□□□ 0.16
CCDC57-218ENST00000583593 FPGSQ05932 587 aa16.08■□□□□ 0.16
CCDC57-218ENST00000583593 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.16
CCDC57-218ENST00000583593 LRRC47Q8N1G4 583 aaKnown RBP16.08■□□□□ 0.16
CCDC57-218ENST00000583593 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
CCDC57-218ENST00000583593 ABHD16BQ9H3Z7 469 aa16.08■□□□□ 0.16
CCDC57-218ENST00000583593 FEM1BQ9UK73 627 aa16.08■□□□□ 0.16
CCDC57-218ENST00000583593 TBX21Q9UL17 535 aa16.08■□□□□ 0.16
CCDC57-218ENST00000583593 MUC3AQ02505 3323 aa16.08■□□□□ 0.16
CCDC57-218ENST00000583593 TMEM265A0A087WTH1 108 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 DCDC2CA8MYV0 355 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 PATL2C9JE40 543 aaKnown RBP16.07■□□□□ 0.16
CCDC57-218ENST00000583593 CTAGE5O15320 804 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 ASGR1P07306 291 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 TDO2P48775 406 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 GJA9P57773 515 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 CCDC144BQ3MJ40 725 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 C16orf59Q7L2K0 433 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 ARMCX2Q7L311 632 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
CCDC57-218ENST00000583593 ANKRD35Q8N283 1001 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms