RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 TSPY3P0CV98 308 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 TSPY8P0CW00 308 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 PSMA5P28066 241 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 ADCK5Q3MIX3 580 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 TMEM179Q6ZVK1 233 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 MB21D2Q8IYB1 491 aaPredicted RBP18.25■□□□□ 0.51
SPECC1-220ENST00000583463 NPLOC4Q8TAT6 608 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 MYLIPQ8WY64 445 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
SPECC1-220ENST00000583463 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 AS3MTQ9HBK9 375 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 CABP5Q9NP86 173 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 TMOD4Q9NZQ9 345 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 SMCHD1A6NHR9 2005 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 ASNSP08243 561 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
SPECC1-220ENST00000583463 RGS2P41220 211 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 TFAP4Q01664 338 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 FAM109BQ6ICB4 259 aaPredicted RBP18.24■□□□□ 0.51
SPECC1-220ENST00000583463 PLEKHH3Q7Z736 793 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 NEDD1Q8NHV4 660 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 APBA2Q99767 749 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 TM6SF1Q9BZW5 370 aa18.24■□□□□ 0.51
SPECC1-220ENST00000583463 TTYH1Q9H313 450 aaPredicted RBP18.24■□□□□ 0.51
SPECC1-220ENST00000583463 MAPK4P31152 587 aa18.23■□□□□ 0.51
SPECC1-220ENST00000583463 CYP2C19P33261 490 aa18.23■□□□□ 0.51
SPECC1-220ENST00000583463 RTP1P59025 263 aa18.23■□□□□ 0.51
SPECC1-220ENST00000583463 GJC2Q5T442 439 aaPredicted RBP18.23■□□□□ 0.51
SPECC1-220ENST00000583463 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
SPECC1-220ENST00000583463 ZNFX1Q9P2E3 1918 aaKnown RBP18.22■□□□□ 0.51
SPECC1-220ENST00000583463 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 USP17L10C9JJH3 530 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 CASTP20810 708 aaKnown RBP18.22■□□□□ 0.51
SPECC1-220ENST00000583463 CNGA1P29973 690 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 MCM5P33992 734 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 MAP2K5Q13163 448 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 ZNF697Q5TEC3 545 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 CYB5R4Q7L1T6 521 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 SH3RF1Q7Z6J0 888 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 IQCA1Q86XH1 822 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 MAFAQ8NHW3 353 aaPredicted RBP18.22■□□□□ 0.51
SPECC1-220ENST00000583463 LBHD1Q9BQE6 289 aaPredicted RBP18.22■□□□□ 0.51
SPECC1-220ENST00000583463 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.22■□□□□ 0.51
SPECC1-220ENST00000583463 TBC1D2Q9BYX2 928 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 SEMA6BQ9H3T3 888 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 BTBD7Q9P203 1132 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 ZSWIM5Q9P217 1185 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 RAPGEFL1Q9UHV5 662 aa18.22■□□□□ 0.51
SPECC1-220ENST00000583463 PRC1O43663 620 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 GUCY1A2P33402 732 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 ANTXR2P58335 489 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 ICA1Q05084 483 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 SEPT2Q15019 361 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 RAB3GAP1Q15042 981 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 CCDC178Q5BJE1 867 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 MTA3Q9BTC8 594 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 KANSL2Q9H9L4 492 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 ZSWIM6Q9HCJ5 1215 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 TCP11L1Q9NUJ3 509 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 DDX20Q9UHI6 824 aaKnown RBP18.21■□□□□ 0.51
SPECC1-220ENST00000583463 ATP11BQ9Y2G3 1177 aa18.21■□□□□ 0.51
SPECC1-220ENST00000583463 RPS6KB1P23443 525 aa18.2■□□□□ 0.5
SPECC1-220ENST00000583463 COL9A3Q14050 684 aaPredicted RBP18.2■□□□□ 0.5
SPECC1-220ENST00000583463 SART3Q15020 963 aaKnown RBP18.2■□□□□ 0.5
SPECC1-220ENST00000583463 DHX32Q7L7V1 743 aaKnown RBP18.2■□□□□ 0.5
SPECC1-220ENST00000583463 CCAR1Q8IX12 1150 aaKnown RBP18.2■□□□□ 0.5
SPECC1-220ENST00000583463 ACER1Q8TDN7 264 aa18.2■□□□□ 0.5
SPECC1-220ENST00000583463 BADQ92934 168 aa18.2■□□□□ 0.5
SPECC1-220ENST00000583463 CEP95Q96GE4 821 aa18.2■□□□□ 0.5
SPECC1-220ENST00000583463 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
SPECC1-220ENST00000583463 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
SPECC1-220ENST00000583463 TNKSO95271 1327 aa18.2■□□□□ 0.5
SPECC1-220ENST00000583463 C19orf81C9J6K1 198 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 NMT2O60551 498 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 ITGB8P26012 769 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 RUFY3Q7L099 469 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 TMEM87BQ96K49 555 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 KIF2CQ99661 725 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
SPECC1-220ENST00000583463 PRDM5Q9NQX1 630 aaPredicted RBP18.19■□□□□ 0.5
SPECC1-220ENST00000583463 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
SPECC1-220ENST00000583463 ERICH2A1L162 156 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 TTLL1O95922 423 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 IGHA2P01877 340 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 CPA1P15085 419 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 PTPREP23469 700 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 EPHB4P54760 987 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
SPECC1-220ENST00000583463 TRIM60Q495X7 471 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 PRAMEF19Q5SWL8 479 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
SPECC1-220ENST00000583463 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
SPECC1-220ENST00000583463 ENAHQ8N8S7 591 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms