RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 PRAMEF19Q5SWL8 479 aa18.23■□□□□ 0.51
CCDC57-215ENST00000582100 VPS53Q5VIR6 699 aa18.23■□□□□ 0.51
CCDC57-215ENST00000582100 SLFN13Q68D06 897 aa18.23■□□□□ 0.51
CCDC57-215ENST00000582100 SNRNP48Q6IEG0 339 aaKnown RBP18.23■□□□□ 0.51
CCDC57-215ENST00000582100 ARRDC4Q8NCT1 418 aa18.23■□□□□ 0.51
CCDC57-215ENST00000582100 GDF15Q99988 308 aa18.23■□□□□ 0.51
CCDC57-215ENST00000582100 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
CCDC57-215ENST00000582100 ZMYND8Q9ULU4 1186 aaPredicted RBP18.23■□□□□ 0.51
CCDC57-215ENST00000582100 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 FDX1P10109 184 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 BMP3P12645 472 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 KIFC2Q96AC6 838 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 TINF2Q9BSI4 451 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 SLC38A10Q9HBR0 1119 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 RIPK3Q9Y572 518 aa18.22■□□□□ 0.51
CCDC57-215ENST00000582100 CTDP1Q9Y5B0 961 aaPredicted RBP18.22■□□□□ 0.51
CCDC57-215ENST00000582100 A0A0D9SFI3 127 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 IGHDP01880 384 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 FGRP09769 529 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 OAZ1P54368 228 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC57-215ENST00000582100 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 GMCL1Q96IK5 515 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 INCENPQ9NQS7 918 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 IL17RBQ9NRM6 502 aa18.21■□□□□ 0.51
CCDC57-215ENST00000582100 PLXNA1Q9UIW2 1896 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 ORC4O43929 436 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 FGAP02671 866 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 SYN1P17600 705 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 NUCB1Q02818 461 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 GJC2Q5T442 439 aaPredicted RBP18.2■□□□□ 0.5
CCDC57-215ENST00000582100 ANO1Q5XXA6 986 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 CPXCR1Q8N123 301 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
CCDC57-215ENST00000582100 EXOC6Q8TAG9 804 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 CHURC1Q8WUH1 139 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 RAVER2Q9HCJ3 691 aaKnown RBP18.2■□□□□ 0.5
CCDC57-215ENST00000582100 STX8Q9UNK0 236 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 TACC3Q9Y6A5 838 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 ZMYM6O95789 1325 aa18.2■□□□□ 0.5
CCDC57-215ENST00000582100 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 DNAJC25-GNG10A0A024R161 153 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 TMEM232C9JQI7 657 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 PLA2G6O60733 806 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 HSPD1P10809 573 aaKnown RBP18.19■□□□□ 0.5
CCDC57-215ENST00000582100 SLC1A4P43007 532 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 NOVP48745 357 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 STAT2P52630 851 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
CCDC57-215ENST00000582100 FAM160B2Q86V87 743 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 PLEKHM2Q8IWE5 1019 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 CHST13Q8NET6 341 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 RILPL2Q969X0 211 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 DDX11Q96FC9 970 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 FBXO40Q9UH90 709 aa18.19■□□□□ 0.5
CCDC57-215ENST00000582100 KBTBD13C9JR72 458 aa18.18■□□□□ 0.5
CCDC57-215ENST00000582100 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
CCDC57-215ENST00000582100 MCCP23508 829 aa18.18■□□□□ 0.5
CCDC57-215ENST00000582100 MAGEA10P43363 369 aaPredicted RBP18.18■□□□□ 0.5
CCDC57-215ENST00000582100 MAMDC4Q6UXC1 1216 aa18.18■□□□□ 0.5
CCDC57-215ENST00000582100 ZNF589Q86UQ0 364 aaPredicted RBP18.18■□□□□ 0.5
CCDC57-215ENST00000582100 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
CCDC57-215ENST00000582100 SMCHD1A6NHR9 2005 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 NMT2O60551 498 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 ZNF865P0CJ78 1059 aaPredicted RBP18.17■□□□□ 0.5
CCDC57-215ENST00000582100 RARBP10826 455 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 LRRC41Q15345 812 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 RCSD1Q6JBY9 416 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 ZNF467Q7Z7K2 595 aaPredicted RBP18.17■□□□□ 0.5
CCDC57-215ENST00000582100 CNPY2Q9Y2B0 182 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 SYNGAP1Q96PV0 1343 aa18.17■□□□□ 0.5
CCDC57-215ENST00000582100 TAL1P17542 331 aaPredicted RBP18.16■□□□□ 0.5
CCDC57-215ENST00000582100 SDSP20132 328 aa18.16■□□□□ 0.5
CCDC57-215ENST00000582100 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
CCDC57-215ENST00000582100 MFAP1P55081 439 aaKnown RBP18.16■□□□□ 0.5
CCDC57-215ENST00000582100 SLC39A5Q6ZMH5 540 aa18.16■□□□□ 0.5
CCDC57-215ENST00000582100 ANKRD35Q8N283 1001 aa18.16■□□□□ 0.5
CCDC57-215ENST00000582100 XPNPEP3Q9NQH7 507 aa18.16■□□□□ 0.5
CCDC57-215ENST00000582100 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
CCDC57-215ENST00000582100 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
CCDC57-215ENST00000582100 LAMA3Q16787 3333 aa18.15■□□□□ 0.5
CCDC57-215ENST00000582100 SNAI1O95863 264 aaPredicted RBP18.15■□□□□ 0.5
CCDC57-215ENST00000582100 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
CCDC57-215ENST00000582100 AKR1A1P14550 325 aa18.15■□□□□ 0.5
CCDC57-215ENST00000582100 RTP1P59025 263 aa18.15■□□□□ 0.5
CCDC57-215ENST00000582100 IKQ13123 557 aaPredicted RBP18.15■□□□□ 0.5
CCDC57-215ENST00000582100 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
CCDC57-215ENST00000582100 TOMM22Q9NS69 142 aa18.15■□□□□ 0.5
CCDC57-215ENST00000582100 ZNF536O15090 1300 aa18.15■□□□□ 0.5
CCDC57-215ENST00000582100 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
CCDC57-215ENST00000582100 ADCYAP1R1P41586 468 aa18.14■□□□□ 0.49
CCDC57-215ENST00000582100 SNX17Q15036 470 aa18.14■□□□□ 0.49
CCDC57-215ENST00000582100 TKFCQ3LXA3 575 aa18.14■□□□□ 0.49
CCDC57-215ENST00000582100 RNF180Q86T96 592 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms