RNA–Protein interactions for RNA: ENST00000581189.1

NDEL1-210, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-210ENST00000581189 RPAP3Q9H6T3 665 aaPredicted RBP7.91□□□□□ -1.14
NDEL1-210ENST00000581189 SH2D4AQ9H788 454 aa7.91□□□□□ -1.14
NDEL1-210ENST00000581189 TXNRD2Q9NNW7 524 aa7.91□□□□□ -1.14
NDEL1-210ENST00000581189 CLIP2Q9UDT6 1046 aa7.91□□□□□ -1.14
NDEL1-210ENST00000581189 PNMA3Q9UL41 463 aa7.91□□□□□ -1.14
NDEL1-210ENST00000581189 ADAMTS5Q9UNA0 930 aa7.91□□□□□ -1.14
NDEL1-210ENST00000581189 R3HCC1Q9Y3T6 440 aaKnown RBP7.91□□□□□ -1.14
NDEL1-210ENST00000581189 NEDD4P46934 1319 aa7.91□□□□□ -1.14
NDEL1-210ENST00000581189 TCHHQ07283 1943 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 TSPY2A6NKD2 308 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 SPDYE16A6NNV3 312 aaPredicted RBP7.9□□□□□ -1.14
NDEL1-210ENST00000581189 WDR46O15213 610 aaKnown RBP7.9□□□□□ -1.14
NDEL1-210ENST00000581189 RANBP6O60518 1105 aaKnown RBP7.9□□□□□ -1.14
NDEL1-210ENST00000581189 PEX10O60683 326 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 NDUFB10O96000 172 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 COG2Q14746 738 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 IMMTQ16891 758 aaKnown RBP7.9□□□□□ -1.14
NDEL1-210ENST00000581189 FAM110CQ1W6H9 321 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 CCDC183Q5T5S1 534 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 STOX1Q6ZVD7 989 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 OTOP1Q7RTM1 612 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 SPICE1Q8N0Z3 855 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 ANKS1AQ92625 1134 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 TTC14Q96N46 770 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 MCOLN1Q9GZU1 580 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 RNF41Q9H4P4 317 aaPredicted RBP7.9□□□□□ -1.14
NDEL1-210ENST00000581189 HOXC10Q9NYD6 342 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 ZSWIM5Q9P217 1185 aa7.9□□□□□ -1.14
NDEL1-210ENST00000581189 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.9□□□□□ -1.14
NDEL1-210ENST00000581189 RBM8AQ9Y5S9 174 aaKnown RBP7.9□□□□□ -1.14
NDEL1-210ENST00000581189 GTF2F1P35269 517 aaKnown RBP eCLIP7.89□□□□□ -1.15
NDEL1-210ENST00000581189 PSMC4P43686 418 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 NEK4P51957 841 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 IRX3P78415 501 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-210ENST00000581189 ATP2B2Q01814 1243 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 COL9A3Q14050 684 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-210ENST00000581189 PKN2Q16513 984 aaKnown RBP7.89□□□□□ -1.15
NDEL1-210ENST00000581189 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 DGKHQ86XP1 1220 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 ANKRD13CQ8N6S4 541 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 REPS2Q8NFH8 660 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 GPT2Q8TD30 523 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 SMCR8Q8TEV9 937 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-210ENST00000581189 GTF3C2Q8WUA4 911 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-210ENST00000581189 ESR2Q92731 530 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 KCNB2Q92953 911 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 GMCL1Q96IK5 515 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 TMX3Q96JJ7 454 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 TMEM47Q9BQJ4 181 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 EFCC1Q9HA90 598 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 BTBD7Q9P203 1132 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 RABGAP1Q9Y3P9 1069 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 MYH8P13535 1937 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 RLFQ13129 1914 aa7.89□□□□□ -1.15
NDEL1-210ENST00000581189 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 SYCE3A1L190 88 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 B4E1Z4 1266 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 E7EWF7 191 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 SLC27A2O14975 620 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 PLA2G6O60733 806 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 KDM4AO75164 1064 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 GNRH1P01148 92 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 SNHG28P0DPA3 235 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 TOP1P11387 765 aaKnown RBP7.88□□□□□ -1.15
NDEL1-210ENST00000581189 ERVK-9P63128 1117 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 ERVK-24P63145 666 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 SEC23AQ15436 765 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 TSGA10IPQ3SY00 556 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 RRP12Q5JTH9 1297 aaKnown RBP7.88□□□□□ -1.15
NDEL1-210ENST00000581189 FAM83BQ5T0W9 1011 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 UTP14CQ5TAP6 766 aaKnown RBP7.88□□□□□ -1.15
NDEL1-210ENST00000581189 SLFN13Q68D06 897 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 FBXO46Q6PJ61 603 aaPredicted RBP7.88□□□□□ -1.15
NDEL1-210ENST00000581189 CYB5R4Q7L1T6 521 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 TNS4Q8IZW8 715 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 LRRC47Q8N1G4 583 aaKnown RBP7.88□□□□□ -1.15
NDEL1-210ENST00000581189 GPRC5AQ8NFJ5 357 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 MYRIPQ8NFW9 859 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 PIBF1Q8WXW3 757 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 NUP88Q99567 741 aaPredicted RBP7.88□□□□□ -1.15
NDEL1-210ENST00000581189 KRT23Q9C075 422 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 CNNM2Q9H8M5 875 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 FBXO28Q9NVF7 368 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 TMEM63CQ9P1W3 806 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 SRRDQ9UH36 339 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 USP25Q9UHP3 1055 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 GJD2Q9UKL4 321 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 PPP1R9AQ9ULJ8 1098 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 STX8Q9UNK0 236 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 PTPN22Q9Y2R2 807 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 TRIM17Q9Y577 477 aa7.88□□□□□ -1.15
NDEL1-210ENST00000581189 LAMA4Q16363 1823 aa7.87□□□□□ -1.15
NDEL1-210ENST00000581189 VWA5AO00534 786 aa7.87□□□□□ -1.15
NDEL1-210ENST00000581189 FLOT1O75955 427 aa7.87□□□□□ -1.15
NDEL1-210ENST00000581189 BMP3P12645 472 aa7.87□□□□□ -1.15
NDEL1-210ENST00000581189 PRMT2P55345 433 aa7.87□□□□□ -1.15
NDEL1-210ENST00000581189 ANTXR2P58335 489 aa7.87□□□□□ -1.15
NDEL1-210ENST00000581189 UBE2HP62256 183 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms