RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.84□□□□□ -0.03
SENP3-204ENST00000580997 ALPK3Q96L96 1907 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 DNM1LO00429 736 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 FGRP09769 529 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 TSPY3P0CV98 308 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 TSPY8P0CW00 308 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 TFAP4Q01664 338 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 KCTD2Q14681 263 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 ALX1Q15699 326 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 ZNF792Q3KQV3 632 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 CCDC129Q6ZRS4 1044 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
SENP3-204ENST00000580997 MMP19Q99542 508 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 RWDD1Q9H446 243 aaPredicted RBP14.83□□□□□ -0.04
SENP3-204ENST00000580997 FEM1BQ9UK73 627 aa14.83□□□□□ -0.04
SENP3-204ENST00000580997 PGK2P07205 417 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 NOVP48745 357 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 CLCN6P51797 869 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 LRRC26Q2I0M4 334 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 FAM47AQ5JRC9 791 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 PRAMEF19Q5SWL8 479 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 VPS53Q5VIR6 699 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
SENP3-204ENST00000580997 ARRDC4Q8NCT1 418 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 SLC38A10Q9HBR0 1119 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 RIPK3Q9Y572 518 aa14.82□□□□□ -0.04
SENP3-204ENST00000580997 ZBED4O75132 1171 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 OAZ1P54368 228 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 MCMDC2Q4G0Z9 681 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 PPP4R3BQ5MIZ7 849 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 SNRNP48Q6IEG0 339 aaKnown RBP14.81□□□□□ -0.04
SENP3-204ENST00000580997 GMCL1Q96IK5 515 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 TINF2Q9BSI4 451 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 SENP6Q9GZR1 1112 aaPredicted RBP14.81□□□□□ -0.04
SENP3-204ENST00000580997 OSBPL3Q9H4L5 887 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 IL17RBQ9NRM6 502 aa14.81□□□□□ -0.04
SENP3-204ENST00000580997 ZMYND8Q9ULU4 1186 aaPredicted RBP14.81□□□□□ -0.04
SENP3-204ENST00000580997 DNAJC25-GNG10A0A024R161 153 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 ORC4O43929 436 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 IGHDP01880 384 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 FDX1P10109 184 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 BMP3P12645 472 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 CTDSPL2Q05D32 466 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 SLFN13Q68D06 897 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
SENP3-204ENST00000580997 MSL3Q8N5Y2 521 aaKnown RBP14.8□□□□□ -0.04
SENP3-204ENST00000580997 KIFC2Q96AC6 838 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 FAM227BQ96M60 508 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 LNPKQ9C0E8 428 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 INCENPQ9NQS7 918 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 TACC3Q9Y6A5 838 aa14.8□□□□□ -0.04
SENP3-204ENST00000580997 COL11A1P12107 1806 aaPredicted RBP14.8□□□□□ -0.04
SENP3-204ENST00000580997 A0A0D9SFI3 127 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 PLA2G6O60733 806 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 ZMYM6O95789 1325 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 FGAP02671 866 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 SYN1P17600 705 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 NUCB1Q02818 461 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 FRMPD3Q5JV73 1810 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 GJC2Q5T442 439 aaPredicted RBP14.79□□□□□ -0.04
SENP3-204ENST00000580997 MAMDC4Q6UXC1 1216 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 CHD1LQ86WJ1 897 aa14.79□□□□□ -0.04
SENP3-204ENST00000580997 SYNGAP1Q96PV0 1343 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 TMEM232C9JQI7 657 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 ZNF865P0CJ78 1059 aaPredicted RBP14.78□□□□□ -0.04
SENP3-204ENST00000580997 HSPD1P10809 573 aaKnown RBP14.78□□□□□ -0.04
SENP3-204ENST00000580997 SLC1A4P43007 532 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 MAGEA10P43363 369 aaPredicted RBP14.78□□□□□ -0.04
SENP3-204ENST00000580997 STAT2P52630 851 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
SENP3-204ENST00000580997 PLEKHM2Q8IWE5 1019 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 CHST13Q8NET6 341 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 CHURC1Q8WUH1 139 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 RAVER2Q9HCJ3 691 aaKnown RBP14.78□□□□□ -0.04
SENP3-204ENST00000580997 FBXO40Q9UH90 709 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 STX8Q9UNK0 236 aa14.78□□□□□ -0.04
SENP3-204ENST00000580997 ZNFX1Q9P2E3 1918 aaKnown RBP14.77□□□□□ -0.04
SENP3-204ENST00000580997 NMT2O60551 498 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 TAL1P17542 331 aaPredicted RBP14.77□□□□□ -0.05
SENP3-204ENST00000580997 MCCP23508 829 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 NMIQ13287 307 aaPredicted RBP14.77□□□□□ -0.05
SENP3-204ENST00000580997 SNX17Q15036 470 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 LRRC41Q15345 812 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 C1orf53Q5VUE5 145 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 ANO1Q5XXA6 986 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 RCSD1Q6JBY9 416 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 B4GALNT3Q6L9W6 998 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 SLC39A5Q6ZMH5 540 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.05
SENP3-204ENST00000580997 FAM160B2Q86V87 743 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 EXOC6Q8TAG9 804 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 STAG1Q8WVM7 1258 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 DDX11Q96FC9 970 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 TCP11L1Q9NUJ3 509 aa14.77□□□□□ -0.05
SENP3-204ENST00000580997 MYH4Q9Y623 1939 aa14.76□□□□□ -0.05
SENP3-204ENST00000580997 ZNF536O15090 1300 aa14.76□□□□□ -0.05
SENP3-204ENST00000580997 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms