RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 SYNPO2Q9UMS6 1093 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 UNC80Q8N2C7 3258 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 DCDC2CA8MYV0 355 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 F5H6K3 240 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 CHGBP05060 677 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 TAL1P17542 331 aaPredicted RBP12.3□□□□□ -0.44
GGA3-210ENST00000580799 ACLYP53396 1101 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 KLRC3Q07444 240 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 SNRNP48Q6IEG0 339 aaKnown RBP12.3□□□□□ -0.44
GGA3-210ENST00000580799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
GGA3-210ENST00000580799 ANKRD33Q7Z3H0 272 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
GGA3-210ENST00000580799 KBTBD3Q8NAB2 608 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 FAM184BQ9ULE4 1060 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
GGA3-210ENST00000580799 LAMA2P24043 3122 aaKnown RBP12.3□□□□□ -0.44
GGA3-210ENST00000580799 MYH4Q9Y623 1939 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 PQBP1O60828 265 aaKnown RBP12.29□□□□□ -0.44
GGA3-210ENST00000580799 ZBED4O75132 1171 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 NDUFB10O96000 172 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
GGA3-210ENST00000580799 GNAT2P19087 354 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 ITGB8P26012 769 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 FPGSQ05932 587 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 MAFAQ8NHW3 353 aaPredicted RBP12.29□□□□□ -0.44
GGA3-210ENST00000580799 APPBP2Q92624 585 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 GPATCH3Q96I76 525 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
GGA3-210ENST00000580799 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
GGA3-210ENST00000580799 STARD7Q9NQZ5 370 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 TMEM39AQ9NV64 488 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 FBXO40Q9UH90 709 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
GGA3-210ENST00000580799 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
GGA3-210ENST00000580799 MINDY4BA8MYZ0 360 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 DUSP11O75319 330 aaKnown RBP12.28□□□□□ -0.44
GGA3-210ENST00000580799 SNAI1O95863 264 aaPredicted RBP12.28□□□□□ -0.44
GGA3-210ENST00000580799 CST5P28325 142 aaPredicted RBP12.28□□□□□ -0.44
GGA3-210ENST00000580799 OAZ1P54368 228 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 FAAP100Q0VG06 881 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 LRRFIP1Q32MZ4 808 aaKnown RBP12.28□□□□□ -0.44
GGA3-210ENST00000580799 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
GGA3-210ENST00000580799 KLHDC9Q8NEP7 349 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 MKL1Q969V6 931 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 TTYH1Q9H313 450 aaPredicted RBP12.28□□□□□ -0.44
GGA3-210ENST00000580799 SPC25Q9HBM1 224 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 CLIP2Q9UDT6 1046 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 FEM1BQ9UK73 627 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 ELP1O95163 1332 aa12.28□□□□□ -0.44
GGA3-210ENST00000580799 IGKV6D-41A0A0C4DH26 115 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 RNF113AO15541 343 aaKnown RBP12.27□□□□□ -0.45
GGA3-210ENST00000580799 FDX1P10109 184 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 TDO2P48775 406 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 EPHB4P54760 987 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 KCNA10Q16322 511 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
GGA3-210ENST00000580799 CCSAPQ6IQ19 270 aaPredicted RBP12.27□□□□□ -0.45
GGA3-210ENST00000580799 ZNF444Q8N0Y2 327 aaPredicted RBP12.27□□□□□ -0.45
GGA3-210ENST00000580799 CPXCR1Q8N123 301 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 ANKRD35Q8N283 1001 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 GMCL1P1Q8NEA9 526 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 CHST13Q8NET6 341 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 MYLIPQ8WY64 445 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 OSBP2Q969R2 916 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 KIFC2Q96AC6 838 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 LENG1Q96BZ8 264 aaPredicted RBP12.27□□□□□ -0.45
GGA3-210ENST00000580799 GLT1D1Q96MS3 346 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 SLC38A10Q9HBR0 1119 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 ZHX1Q9UKY1 873 aaPredicted RBP12.27□□□□□ -0.45
GGA3-210ENST00000580799 RIPK3Q9Y572 518 aa12.27□□□□□ -0.45
GGA3-210ENST00000580799 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.26□□□□□ -0.45
GGA3-210ENST00000580799 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.26□□□□□ -0.45
GGA3-210ENST00000580799 GPAA1O43292 621 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 SMARCA5O60264 1052 aaPredicted RBP12.26□□□□□ -0.45
GGA3-210ENST00000580799 TTLL1O95922 423 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 TIMP1P01033 207 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 FOSL2P15408 326 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 CEP95Q96GE4 821 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 UPF3AQ9H1J1 476 aaKnown RBP12.26□□□□□ -0.45
GGA3-210ENST00000580799 EPB41L4AQ9HCS5 686 aaPredicted RBP12.26□□□□□ -0.45
GGA3-210ENST00000580799 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
GGA3-210ENST00000580799 MTMR4Q9NYA4 1195 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 TBX21Q9UL17 535 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 PLIN4Q96Q06 1357 aa12.26□□□□□ -0.45
GGA3-210ENST00000580799 APPP05067 770 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 C6orf222P0C671 652 aaPredicted RBP12.25□□□□□ -0.45
GGA3-210ENST00000580799 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 CDK7P50613 346 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 GJA9P57773 515 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 PDE4BQ07343 736 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms