RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 MYL10Q9BUA6 226 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 MAD2L2Q9UI95 211 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 PDHXO00330 501 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 TM4SF4P48230 202 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 HMGN5P82970 282 aaKnown RBP13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 ME3Q16798 604 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 SYDE2Q5VT97 1194 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 BRI3BPQ8WY22 251 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 RRP36Q96EU6 259 aaKnown RBP13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 PPP1R9AQ9ULJ8 1098 aa13.63□□□□□ -0.23
SNORD3C-201ENST00000580533 BTBD19C9JJ37 291 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 IFNAR1P17181 557 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 XBP1P17861 261 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 RXRAP19793 462 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 COPB2P35606 906 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 GCLCP48506 637 aaPredicted RBP13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 KIF23Q02241 960 aaPredicted RBP13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 SSRP1Q08945 709 aaKnown RBP13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 SCRN1Q12765 414 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 TREML2Q5T2D2 321 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 KIFC2Q96AC6 838 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 NUP88Q99567 741 aaPredicted RBP13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 RNF26Q9BY78 433 aaPredicted RBP13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
SNORD3C-201ENST00000580533 PTPRFP10586 1907 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 DSG3P32926 999 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 VEGFBP49765 207 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 OAZ1P54368 228 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 MOGSQ13724 837 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 GPAT2Q6NUI2 795 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 FAM177A1Q8N128 213 aaPredicted RBP13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 CCDC12Q8WUD4 166 aaPredicted RBP13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 ASCC2Q9H1I8 757 aaPredicted RBP13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 ZFYVE28Q9HCC9 887 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 STK36Q9NRP7 1315 aa13.61□□□□□ -0.23
SNORD3C-201ENST00000580533 DEXIO95424 95 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 PDIA4P13667 645 aaKnown RBP13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 ADD1P35611 737 aaKnown RBP13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 HERVK_113P62684 666 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 CCNA1P78396 465 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 MAP2K1Q02750 393 aaPredicted RBP13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 TAF1CQ15572 869 aaPredicted RBP13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 CCDC83Q8IWF9 413 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 ADGRF4Q8IZF3 695 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 STAG2Q8N3U4 1231 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 PRR12Q9ULL5 1215 aa13.6□□□□□ -0.23
SNORD3C-201ENST00000580533 PNMA6FA0A0J9YX94 578 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 ZBTB5O15062 677 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 PRPF3O43395 683 aaKnown RBP13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 CA12O43570 354 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 PLEKHA8P1O95397 391 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 FMNL1O95466 1100 aaPredicted RBP13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 CDC27P30260 824 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 SLC16A2P36021 539 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 DGKZQ13574 1117 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 CDC37Q16543 378 aaPredicted RBP13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 TEX2Q8IWB9 1127 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 FAM43AQ8N2R8 423 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 AMNQ9BXJ7 453 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 SLC26A6Q9BXS9 759 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 GLT8D2Q9H1C3 349 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 VAT1LQ9HCJ6 419 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 SMC3Q9UQE7 1217 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 RABGAP1Q9Y3P9 1069 aa13.59□□□□□ -0.23
SNORD3C-201ENST00000580533 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 VWA5AO00534 786 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 AOC2O75106 756 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 CD2BP2O95400 341 aaKnown RBP13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 PDCP20941 246 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 CUL4AQ13619 759 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 TRIM29Q14134 588 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 TKFCQ3LXA3 575 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 TTBK2Q6IQ55 1244 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 PPP1R18Q6NYC8 613 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms