RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 RUFY2Q8WXA3 655 aa23.77■■□□□ 1.4
SMG8-204ENST00000580498 GMCL1Q96IK5 515 aa23.77■■□□□ 1.4
SMG8-204ENST00000580498 PAWRQ96IZ0 340 aaKnown RBP23.77■■□□□ 1.4
SMG8-204ENST00000580498 FBXO40Q9UH90 709 aa23.77■■□□□ 1.4
SMG8-204ENST00000580498 OGDHLQ9ULD0 1010 aa23.77■■□□□ 1.4
SMG8-204ENST00000580498 FOXP2O15409 715 aa23.76■■□□□ 1.39
SMG8-204ENST00000580498 SLC4A3P48751 1232 aa23.76■■□□□ 1.39
SMG8-204ENST00000580498 OAZ1P54368 228 aa23.76■■□□□ 1.39
SMG8-204ENST00000580498 AKNAD1Q5T1N1 836 aa23.76■■□□□ 1.39
SMG8-204ENST00000580498 ESR2Q92731 530 aa23.76■■□□□ 1.39
SMG8-204ENST00000580498 DDX11Q96FC9 970 aa23.76■■□□□ 1.39
SMG8-204ENST00000580498 ZNF214Q9UL59 606 aaPredicted RBP23.76■■□□□ 1.39
SMG8-204ENST00000580498 TMEM232C9JQI7 657 aa23.75■■□□□ 1.39
SMG8-204ENST00000580498 ATP2A1O14983 1001 aa23.75■■□□□ 1.39
SMG8-204ENST00000580498 CCND3P30281 292 aaPredicted RBP23.75■■□□□ 1.39
SMG8-204ENST00000580498 HAND2P61296 217 aa23.75■■□□□ 1.39
SMG8-204ENST00000580498 IMMTQ16891 758 aaKnown RBP23.75■■□□□ 1.39
SMG8-204ENST00000580498 CCDC178Q5BJE1 867 aa23.75■■□□□ 1.39
SMG8-204ENST00000580498 CPXCR1Q8N123 301 aa23.75■■□□□ 1.39
SMG8-204ENST00000580498 C11orf49Q9H6J7 331 aa23.75■■□□□ 1.39
SMG8-204ENST00000580498 DIS3Q9Y2L1 958 aaKnown RBP23.75■■□□□ 1.39
SMG8-204ENST00000580498 FGRP09769 529 aa23.74■■□□□ 1.39
SMG8-204ENST00000580498 CYP2C19P33261 490 aa23.74■■□□□ 1.39
SMG8-204ENST00000580498 CCDC96Q2M329 555 aa23.74■■□□□ 1.39
SMG8-204ENST00000580498 TTC22Q5TAA0 569 aa23.74■■□□□ 1.39
SMG8-204ENST00000580498 STAG1Q8WVM7 1258 aa23.74■■□□□ 1.39
SMG8-204ENST00000580498 DSCC1Q9BVC3 393 aa23.74■■□□□ 1.39
SMG8-204ENST00000580498 DDX20Q9UHI6 824 aaKnown RBP23.74■■□□□ 1.39
SMG8-204ENST00000580498 TOP1P11387 765 aaKnown RBP23.73■■□□□ 1.39
SMG8-204ENST00000580498 MCCP23508 829 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 RCSD1Q6JBY9 416 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 IQCA1Q86XH1 822 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 CHST13Q8NET6 341 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 REPS2Q8NFH8 660 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 DCAF4Q8WV16 495 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 SLC38A10Q9HBR0 1119 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 TCP11L1Q9NUJ3 509 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 FLRT1Q9NZU1 646 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 NRBP1Q9UHY1 535 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 BRCA2P51587 3418 aa23.73■■□□□ 1.39
SMG8-204ENST00000580498 ZNFX1Q9P2E3 1918 aaKnown RBP23.72■■□□□ 1.39
SMG8-204ENST00000580498 PLA2G6O60733 806 aa23.72■■□□□ 1.39
SMG8-204ENST00000580498 COBLO75128 1261 aa23.72■■□□□ 1.39
SMG8-204ENST00000580498 MAML3Q96JK9 1138 aa23.72■■□□□ 1.39
SMG8-204ENST00000580498 TTC14Q96N46 770 aa23.72■■□□□ 1.39
SMG8-204ENST00000580498 MTMR7Q9Y216 660 aa23.72■■□□□ 1.39
SMG8-204ENST00000580498 RAD50Q92878 1312 aa23.72■■□□□ 1.39
SMG8-204ENST00000580498 ANKRD35Q8N283 1001 aa23.71■■□□□ 1.39
SMG8-204ENST00000580498 MSL3Q8N5Y2 521 aaKnown RBP23.71■■□□□ 1.39
SMG8-204ENST00000580498 ARRDC4Q8NCT1 418 aa23.71■■□□□ 1.39
SMG8-204ENST00000580498 RAVER2Q9HCJ3 691 aaKnown RBP23.71■■□□□ 1.39
SMG8-204ENST00000580498 INCENPQ9NQS7 918 aa23.71■■□□□ 1.39
SMG8-204ENST00000580498 IL17RBQ9NRM6 502 aa23.71■■□□□ 1.39
SMG8-204ENST00000580498 CNPY2Q9Y2B0 182 aa23.71■■□□□ 1.39
SMG8-204ENST00000580498 H0YGN5 161 aa23.7■■□□□ 1.38
SMG8-204ENST00000580498 NMT2O60551 498 aa23.7■■□□□ 1.38
SMG8-204ENST00000580498 CYBAP13498 195 aa23.7■■□□□ 1.38
SMG8-204ENST00000580498 TKFCQ3LXA3 575 aa23.7■■□□□ 1.38
SMG8-204ENST00000580498 CNNM2Q9H8M5 875 aa23.7■■□□□ 1.38
SMG8-204ENST00000580498 PNMA2Q9UL42 364 aa23.7■■□□□ 1.38
SMG8-204ENST00000580498 SEPT4O43236 478 aa23.69■■□□□ 1.38
SMG8-204ENST00000580498 KCTD1Q719H9 257 aa23.69■■□□□ 1.38
SMG8-204ENST00000580498 DIS3LQ8TF46 1054 aaKnown RBP23.69■■□□□ 1.38
SMG8-204ENST00000580498 KRT23Q9C075 422 aa23.69■■□□□ 1.38
SMG8-204ENST00000580498 KBTBD13C9JR72 458 aa23.68■■□□□ 1.38
SMG8-204ENST00000580498 PGK2P07205 417 aa23.68■■□□□ 1.38
SMG8-204ENST00000580498 LHX8Q68G74 356 aa23.68■■□□□ 1.38
SMG8-204ENST00000580498 TINF2Q9BSI4 451 aa23.68■■□□□ 1.38
SMG8-204ENST00000580498 ACAD9Q9H845 621 aa23.68■■□□□ 1.38
SMG8-204ENST00000580498 PLXNA1Q9UIW2 1896 aa23.68■■□□□ 1.38
SMG8-204ENST00000580498 MKI67P46013 3256 aaKnown RBP23.67■■□□□ 1.38
SMG8-204ENST00000580498 PDE4AP27815 886 aa23.67■■□□□ 1.38
SMG8-204ENST00000580498 TRDNQ13061 729 aa23.67■■□□□ 1.38
SMG8-204ENST00000580498 ZNF792Q3KQV3 632 aa23.67■■□□□ 1.38
SMG8-204ENST00000580498 CHMP4CQ96CF2 233 aa23.67■■□□□ 1.38
SMG8-204ENST00000580498 LAMA4Q16363 1823 aa23.67■■□□□ 1.38
SMG8-204ENST00000580498 DNM1LO00429 736 aa23.66■■□□□ 1.38
SMG8-204ENST00000580498 RARBP10826 455 aa23.66■■□□□ 1.38
SMG8-204ENST00000580498 NOVP48745 357 aa23.66■■□□□ 1.38
SMG8-204ENST00000580498 TBC1D10CQ8IV04 446 aa23.66■■□□□ 1.38
SMG8-204ENST00000580498 TMEM47Q9BQJ4 181 aa23.66■■□□□ 1.38
SMG8-204ENST00000580498 HOMER2Q9NSB8 354 aa23.66■■□□□ 1.38
SMG8-204ENST00000580498 PFASO15067 1338 aa23.65■■□□□ 1.38
SMG8-204ENST00000580498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.65■■□□□ 1.38
SMG8-204ENST00000580498 ZNF467Q7Z7K2 595 aaPredicted RBP23.65■■□□□ 1.38
SMG8-204ENST00000580498 DGKHQ86XP1 1220 aa23.65■■□□□ 1.38
SMG8-204ENST00000580498 UBAC1Q9BSL1 405 aa23.65■■□□□ 1.38
SMG8-204ENST00000580498 PRR12Q9ULL5 1215 aa23.65■■□□□ 1.38
SMG8-204ENST00000580498 RIPK3Q9Y572 518 aa23.65■■□□□ 1.38
SMG8-204ENST00000580498 FRMPD3Q5JV73 1810 aa23.65■■□□□ 1.38
SMG8-204ENST00000580498 SYNGAP1Q96PV0 1343 aa23.64■■□□□ 1.38
SMG8-204ENST00000580498 MYCNP04198 464 aaPredicted RBP23.64■■□□□ 1.37
SMG8-204ENST00000580498 ALAS1P13196 640 aa23.64■■□□□ 1.37
SMG8-204ENST00000580498 GSPT1P15170 499 aaKnown RBP23.64■■□□□ 1.37
SMG8-204ENST00000580498 CCDC174Q6PII3 467 aa23.64■■□□□ 1.37
SMG8-204ENST00000580498 C7orf61Q8IZ16 206 aa23.64■■□□□ 1.37
SMG8-204ENST00000580498 KAT14Q9H8E8 782 aa23.64■■□□□ 1.37
SMG8-204ENST00000580498 RNF146Q9NTX7 359 aa23.64■■□□□ 1.37
SMG8-204ENST00000580498 CCPG1Q9ULG6 757 aa23.64■■□□□ 1.37
SMG8-204ENST00000580498 NEDD4P46934 1319 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms