RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 AXIN2Q9Y2T1 843 aa15.08■□□□□ 0
TRAPPC8-207ENST00000580104 ERVV-2B6SEH9 535 aa15.08■□□□□ 0
TRAPPC8-207ENST00000580104 DYNLL1P63167 89 aaKnown RBP15.08■□□□□ 0
TRAPPC8-207ENST00000580104 EHHADHQ08426 723 aa15.08■□□□□ 0
TRAPPC8-207ENST00000580104 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
TRAPPC8-207ENST00000580104 UTP11Q9Y3A2 253 aaKnown RBP15.08■□□□□ 0
TRAPPC8-207ENST00000580104 MYO3AQ8NEV4 1616 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 ERBB3P21860 1342 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 H7C1W4 665 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 PTPREP23469 700 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 PEX26Q7Z412 305 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 MB21D2Q8IYB1 491 aaPredicted RBP15.07■□□□□ 0
TRAPPC8-207ENST00000580104 ALDH8A1Q9H2A2 487 aaPredicted RBP15.07■□□□□ 0
TRAPPC8-207ENST00000580104 TCP1P17987 556 aaKnown RBP15.07■□□□□ 0
TRAPPC8-207ENST00000580104 ZNF804AQ7Z570 1209 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 REXO1Q8N1G1 1221 aaKnown RBP15.07■□□□□ 0
TRAPPC8-207ENST00000580104 FBF1Q8TES7 1133 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 ZNF609O15014 1411 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 NEDD4P46934 1319 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 USP42Q9H9J4 1324 aaKnown RBP15.07■□□□□ 0
TRAPPC8-207ENST00000580104 POLR2FP61218 127 aaKnown RBP15.07■□□□□ 0
TRAPPC8-207ENST00000580104 EXOSC10Q01780 885 aaKnown RBP15.07■□□□□ 0
TRAPPC8-207ENST00000580104 SCARF1Q14162 830 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 CCDC174Q6PII3 467 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 RUFY4Q6ZNE9 571 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 PLVAPQ9BX97 442 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 MYO1AQ9UBC5 1043 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 PTPRMP28827 1452 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 CHD1O14646 1710 aa15.07■□□□□ 0
TRAPPC8-207ENST00000580104 REREQ9P2R6 1566 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 CHMP2AO43633 222 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 CTDNEP1O95476 244 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 PRPHP41219 470 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 IRX5P78411 483 aaPredicted RBP15.06■□□□□ 0
TRAPPC8-207ENST00000580104 CALCOCO2Q13137 446 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 METTL16Q86W50 562 aaKnown RBP15.06■□□□□ 0
TRAPPC8-207ENST00000580104 CCDC50Q8IVM0 306 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 RIMBP2O15034 1052 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 GSTA5Q7RTV2 222 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 UHMK1Q8TAS1 419 aaKnown RBP15.06■□□□□ 0
TRAPPC8-207ENST00000580104 DPH5Q9H2P9 285 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 BAIAP2L1Q9UHR4 511 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 ADGRG1Q9Y653 693 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 PLEKHG1Q9ULL1 1385 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 GOLGA8KD6RF30 607 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 MAP2K2P36507 400 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 PARP10Q53GL7 1025 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 NYAP1Q6ZVC0 841 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 KRT12Q99456 494 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 HDAC6Q9UBN7 1215 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 ZBTB21Q9ULJ3 1066 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 SALL3Q9BXA9 1300 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 RPL13P26373 211 aaKnown RBP15.06■□□□□ 0
TRAPPC8-207ENST00000580104 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
TRAPPC8-207ENST00000580104 CCDC6Q16204 474 aa15.06■□□□□ 0
TRAPPC8-207ENST00000580104 A2ML1A8K2U0 1454 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 A6NNZ2 444 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 MOCS3O95396 460 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 EPB41P11171 864 aaKnown RBP15.05■□□□□ 0
TRAPPC8-207ENST00000580104 EEF2P13639 858 aaKnown RBP15.05■□□□□ 0
TRAPPC8-207ENST00000580104 ABCB4P21439 1286 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 TUBB8Q3ZCM7 444 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 MRRFQ96E11 262 aaKnown RBP15.05■□□□□ 0
TRAPPC8-207ENST00000580104 MRFAP1Q9Y605 127 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 TRIM49BA6NDI0 452 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 PLEKHA8P1O95397 391 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 TNFAIP3P21580 790 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 LIFRP42702 1097 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 CHRNDQ07001 517 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 VWA3BQ502W6 1294 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 NAA35Q5VZE5 725 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 STRBPQ96SI9 672 aaKnown RBP15.05■□□□□ 0
TRAPPC8-207ENST00000580104 STMN4Q9H169 189 aaPredicted RBP15.05■□□□□ 0
TRAPPC8-207ENST00000580104 PKD2L1Q9P0L9 805 aa15.05■□□□□ 0
TRAPPC8-207ENST00000580104 CPS1P31327 1500 aa15.05■□□□□ -0
TRAPPC8-207ENST00000580104 CUL4BQ13620 913 aa15.05■□□□□ -0
TRAPPC8-207ENST00000580104 ZNF658Q5TYW1 1059 aaPredicted RBP15.05■□□□□ -0
TRAPPC8-207ENST00000580104 EPB41L5Q9HCM4 733 aa15.05■□□□□ -0
TRAPPC8-207ENST00000580104 LONP1P36776 959 aaKnown RBP15.05■□□□□ -0
TRAPPC8-207ENST00000580104 PLCB3Q01970 1234 aa15.05■□□□□ -0
TRAPPC8-207ENST00000580104 LRRC41Q15345 812 aa15.05■□□□□ -0
TRAPPC8-207ENST00000580104 SPOPO43791 374 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 OR52Z1P0C646 297 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 HSPA2P54652 639 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 RASGRF1Q13972 1273 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 ANKRD2Q9GZV1 360 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 NHEJ1Q9H9Q4 299 aaPredicted RBP15.04■□□□□ -0
TRAPPC8-207ENST00000580104 PPRC1Q5VV67 1664 aaKnown RBP15.04■□□□□ -0
TRAPPC8-207ENST00000580104 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 FDPSP14324 419 aaKnown RBP15.04■□□□□ -0
TRAPPC8-207ENST00000580104 TCP11X2Q5H9J9 407 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 BICD1Q96G01 975 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 CCDC77Q9BR77 488 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 TSKSQ9UJT2 592 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 PCDHB13Q9Y5F0 798 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 MAP3K15Q6ZN16 1313 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
TRAPPC8-207ENST00000580104 KLRF2D3W0D1 207 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms