RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 TRPV1Q8NER1 839 aa28.14■■■□□ 2.1
CDKN2A-214ENST00000579755 REPS2Q8NFH8 660 aa28.14■■■□□ 2.1
CDKN2A-214ENST00000579755 STX8Q9UNK0 236 aa28.14■■■□□ 2.1
CDKN2A-214ENST00000579755 PLIN4Q96Q06 1357 aa28.13■■■□□ 2.09
CDKN2A-214ENST00000579755 IKQ13123 557 aaPredicted RBP28.13■■■□□ 2.09
CDKN2A-214ENST00000579755 ARRDC4Q8NCT1 418 aa28.13■■■□□ 2.09
CDKN2A-214ENST00000579755 DDX11Q96FC9 970 aa28.13■■■□□ 2.09
CDKN2A-214ENST00000579755 ZNFX1Q9P2E3 1918 aaKnown RBP28.13■■■□□ 2.09
CDKN2A-214ENST00000579755 FXR1P51114 621 aaKnown RBP eCLIP28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 NUCB1Q02818 461 aa28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 NMIQ13287 307 aaPredicted RBP28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 ALX1Q15699 326 aa28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 PRAMEF19Q5SWL8 479 aa28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 SENP6Q9GZR1 1112 aaPredicted RBP28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 INCENPQ9NQS7 918 aa28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 ANAPC4Q9UJX5 808 aa28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 ZMYND8Q9ULU4 1186 aaPredicted RBP28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 DIS3Q9Y2L1 958 aaKnown RBP28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 PFASO15067 1338 aa28.12■■■□□ 2.09
CDKN2A-214ENST00000579755 A0A0D9SFI3 127 aa28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 FOXP2O15409 715 aa28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 SEPT4O43236 478 aa28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 IGHA2P01877 340 aa28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 MYCNP04198 464 aaPredicted RBP28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 COL6A1P12109 1028 aa28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 SLC1A4P43007 532 aa28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 MFAP1P55081 439 aaKnown RBP28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.11■■■□□ 2.09
CDKN2A-214ENST00000579755 TMEM232C9JQI7 657 aa28.1■■■□□ 2.09
CDKN2A-214ENST00000579755 FGAP02671 866 aa28.1■■■□□ 2.09
CDKN2A-214ENST00000579755 ANO1Q5XXA6 986 aa28.1■■■□□ 2.09
CDKN2A-214ENST00000579755 CHURC1Q8WUH1 139 aa28.1■■■□□ 2.09
CDKN2A-214ENST00000579755 CHMP4CQ96CF2 233 aa28.1■■■□□ 2.09
CDKN2A-214ENST00000579755 RAVER2Q9HCJ3 691 aaKnown RBP28.1■■■□□ 2.09
CDKN2A-214ENST00000579755 DNM1LO00429 736 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 ATP2A1O14983 1001 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 FDX1P10109 184 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 ZNF792Q3KQV3 632 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 RRP12Q5JTH9 1297 aaKnown RBP28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 PLEKHM2Q8IWE5 1019 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 TINF2Q9BSI4 451 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 NRBP1Q9UHY1 535 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 ALPK3Q96L96 1907 aa28.09■■■□□ 2.09
CDKN2A-214ENST00000579755 KBTBD13C9JR72 458 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 HSPD1P10809 573 aaKnown RBP28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 SYN1P17600 705 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 MCCP23508 829 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 STAT2P52630 851 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 GJC2Q5T442 439 aaPredicted RBP28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 FAM160B2Q86V87 743 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 SLC38A10Q9HBR0 1119 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 FBXO40Q9UH90 709 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 CNPY2Q9Y2B0 182 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 RIPK3Q9Y572 518 aa28.08■■■□□ 2.09
CDKN2A-214ENST00000579755 ORC4O43929 436 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 SDSP20132 328 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 ANKRD35Q8N283 1001 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 STAG1Q8WVM7 1258 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 GMCL1Q96IK5 515 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 OSBPL3Q9H4L5 887 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 IL17RBQ9NRM6 502 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 PCDH10Q9P2E7 1040 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 MTMR7Q9Y216 660 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 CCDC171Q6TFL3 1326 aa28.07■■■□□ 2.08
CDKN2A-214ENST00000579755 NMT2O60551 498 aa28.06■■■□□ 2.08
CDKN2A-214ENST00000579755 OAZ1P54368 228 aa28.06■■■□□ 2.08
CDKN2A-214ENST00000579755 LRRC26Q2I0M4 334 aa28.06■■■□□ 2.08
CDKN2A-214ENST00000579755 DIAPH3Q9NSV4 1193 aa28.06■■■□□ 2.08
CDKN2A-214ENST00000579755 FRMPD3Q5JV73 1810 aa28.06■■■□□ 2.08
CDKN2A-214ENST00000579755 RCSD1Q6JBY9 416 aa28.05■■■□□ 2.08
CDKN2A-214ENST00000579755 ZNF589Q86UQ0 364 aaPredicted RBP28.05■■■□□ 2.08
CDKN2A-214ENST00000579755 CHST13Q8NET6 341 aa28.05■■■□□ 2.08
CDKN2A-214ENST00000579755 A0A1W2PPC1 479 aa28.04■■■□□ 2.08
CDKN2A-214ENST00000579755 RARBP10826 455 aa28.04■■■□□ 2.08
CDKN2A-214ENST00000579755 ATN1P54259 1190 aaPredicted RBP28.04■■■□□ 2.08
CDKN2A-214ENST00000579755 MFSD6Q6ZSS7 791 aa28.04■■■□□ 2.08
CDKN2A-214ENST00000579755 KCTD1Q719H9 257 aa28.04■■■□□ 2.08
CDKN2A-214ENST00000579755 PRO3102Q9H379 93 aa28.04■■■□□ 2.08
CDKN2A-214ENST00000579755 HIP1O00291 1037 aa28.03■■■□□ 2.08
CDKN2A-214ENST00000579755 FGRP09769 529 aa28.03■■■□□ 2.08
CDKN2A-214ENST00000579755 HAND2P61296 217 aa28.03■■■□□ 2.08
CDKN2A-214ENST00000579755 MSL3Q8N5Y2 521 aaKnown RBP28.03■■■□□ 2.08
CDKN2A-214ENST00000579755 HOMER2Q9NSB8 354 aa28.03■■■□□ 2.08
CDKN2A-214ENST00000579755 PLXNA1Q9UIW2 1896 aa28.03■■■□□ 2.08
CDKN2A-214ENST00000579755 ZMYM6O95789 1325 aa28.02■■■□□ 2.08
CDKN2A-214ENST00000579755 CCDC96Q2M329 555 aa28.02■■■□□ 2.08
CDKN2A-214ENST00000579755 CWC27Q6UX04 472 aaKnown RBP28.02■■■□□ 2.08
CDKN2A-214ENST00000579755 XPNPEP3Q9NQH7 507 aa28.02■■■□□ 2.08
CDKN2A-214ENST00000579755 TACC3Q9Y6A5 838 aa28.02■■■□□ 2.08
CDKN2A-214ENST00000579755 GDF15Q99988 308 aa28.01■■■□□ 2.07
CDKN2A-214ENST00000579755 RNF41Q9H4P4 317 aaPredicted RBP28.01■■■□□ 2.07
CDKN2A-214ENST00000579755 PRKAG2Q9UGJ0 569 aa28.01■■■□□ 2.07
CDKN2A-214ENST00000579755 TRIOBPQ9H2D6 2365 aa28■■■□□ 2.07
CDKN2A-214ENST00000579755 PLA2G6O60733 806 aa28■■■□□ 2.07
CDKN2A-214ENST00000579755 PCP11498 1178 aaKnown RBP28■■■□□ 2.07
CDKN2A-214ENST00000579755 AKR1A1P14550 325 aa28■■■□□ 2.07
CDKN2A-214ENST00000579755 BMP8BP34820 402 aa28■■■□□ 2.07
CDKN2A-214ENST00000579755 LRRC41Q15345 812 aa28■■■□□ 2.07
CDKN2A-214ENST00000579755 AKNAD1Q5T1N1 836 aa28■■■□□ 2.07
CDKN2A-214ENST00000579755 ACAD9Q9H845 621 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms