RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 IGKV6D-41A0A0C4DH26 115 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 TSPY2A6NKD2 308 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 BMP3P12645 472 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 AKR1A1P14550 325 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 OAZ1P54368 228 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.2
GGA3-208ENST00000579743 ZNF792Q3KQV3 632 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 PRAMEF19Q5SWL8 479 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 SLFN13Q68D06 897 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 FAM160B2Q86V87 743 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 CHST13Q8NET6 341 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
GGA3-208ENST00000579743 SLC1A4P43007 532 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 STAT2P52630 851 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 RTP1P59025 263 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 LRRC41Q15345 812 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 LRIT3Q3SXY7 679 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 ANO1Q5XXA6 986 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 LRRC47Q8N1G4 583 aaKnown RBP16.26■□□□□ 0.19
GGA3-208ENST00000579743 REPS2Q8NFH8 660 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 CRBNQ96SW2 442 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 SEC62Q99442 399 aaKnown RBP16.26■□□□□ 0.19
GGA3-208ENST00000579743 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 PLIN4Q96Q06 1357 aa16.26■□□□□ 0.19
GGA3-208ENST00000579743 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
GGA3-208ENST00000579743 FRMPD3Q5JV73 1810 aa16.25■□□□□ 0.19
GGA3-208ENST00000579743 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
GGA3-208ENST00000579743 MDM2Q00987 491 aaPredicted RBP16.25■□□□□ 0.19
GGA3-208ENST00000579743 FAM47AQ5JRC9 791 aa16.25■□□□□ 0.19
GGA3-208ENST00000579743 OTUD7AQ8TE49 926 aaPredicted RBP16.25■□□□□ 0.19
GGA3-208ENST00000579743 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
GGA3-208ENST00000579743 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
GGA3-208ENST00000579743 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
GGA3-208ENST00000579743 RAVER2Q9HCJ3 691 aaKnown RBP16.25■□□□□ 0.19
GGA3-208ENST00000579743 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
GGA3-208ENST00000579743 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
GGA3-208ENST00000579743 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
GGA3-208ENST00000579743 GREB1LQ9C091 1923 aaPredicted RBP16.24■□□□□ 0.19
GGA3-208ENST00000579743 ZNFX1Q9P2E3 1918 aaKnown RBP16.24■□□□□ 0.19
GGA3-208ENST00000579743 TMEM232C9JQI7 657 aa16.24■□□□□ 0.19
GGA3-208ENST00000579743 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
GGA3-208ENST00000579743 PDE1AP54750 535 aa16.24■□□□□ 0.19
GGA3-208ENST00000579743 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
GGA3-208ENST00000579743 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
GGA3-208ENST00000579743 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
GGA3-208ENST00000579743 TOMM22Q9NS69 142 aa16.24■□□□□ 0.19
GGA3-208ENST00000579743 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 TKFCQ3LXA3 575 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 MCMDC2Q4G0Z9 681 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 C1orf53Q5VUE5 145 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 NUP133Q8WUM0 1156 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 STAG1Q8WVM7 1258 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 LRCH3Q96II8 777 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
GGA3-208ENST00000579743 PHF24Q9UPV7 400 aa16.23■□□□□ 0.19
GGA3-208ENST00000579743 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 SOX1O00570 391 aaPredicted RBP16.22■□□□□ 0.19
GGA3-208ENST00000579743 ALX1Q15699 326 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 MAMDC4Q6UXC1 1216 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 TSEN34Q9BSV6 310 aaKnown RBP16.22■□□□□ 0.19
GGA3-208ENST00000579743 ABHD16BQ9H3Z7 469 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 ACAD9Q9H845 621 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
GGA3-208ENST00000579743 TACC3Q9Y6A5 838 aa16.22■□□□□ 0.19
GGA3-208ENST00000579743 MOXD2PA6NHM9 499 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 PLA2G6O60733 806 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 PGK1P00558 417 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 MCCP23508 829 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 CTDSPL2Q05D32 466 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 TRIM60Q495X7 471 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 RCSD1Q6JBY9 416 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 CCDC129Q6ZRS4 1044 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
GGA3-208ENST00000579743 DEFB123Q8N688 67 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
GGA3-208ENST00000579743 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
GGA3-208ENST00000579743 SALL3Q9BXA9 1300 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 PLXNA1Q9UIW2 1896 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 DNAJC25-GNG10A0A024R161 153 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 ASB14A6NK59 587 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 ORC4O43929 436 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
GGA3-208ENST00000579743 PCP11498 1178 aaKnown RBP16.2■□□□□ 0.18
GGA3-208ENST00000579743 ACVR2BQ13705 512 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 SNX17Q15036 470 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 PCSK9Q8NBP7 692 aaKnown RBP16.2■□□□□ 0.18
GGA3-208ENST00000579743 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 HOMER2Q9NSB8 354 aa16.2■□□□□ 0.18
GGA3-208ENST00000579743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.2■□□□□ 0.18
GGA3-208ENST00000579743 DCDC2CA8MYV0 355 aa16.19■□□□□ 0.18
GGA3-208ENST00000579743 DUSP11O75319 330 aaKnown RBP16.19■□□□□ 0.18
GGA3-208ENST00000579743 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
GGA3-208ENST00000579743 CCDC96Q2M329 555 aa16.19■□□□□ 0.18
GGA3-208ENST00000579743 RRP12Q5JTH9 1297 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms