RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 DCAF4Q8WV16 495 aa28.16■■■□□ 2.1
LIMD2-207ENST00000579329 APBA2Q99767 749 aa28.16■■■□□ 2.1
LIMD2-207ENST00000579329 ZNF214Q9UL59 606 aaPredicted RBP28.16■■■□□ 2.1
LIMD2-207ENST00000579329 MTMR7Q9Y216 660 aa28.16■■■□□ 2.1
LIMD2-207ENST00000579329 CTDP1Q9Y5B0 961 aaPredicted RBP28.16■■■□□ 2.1
LIMD2-207ENST00000579329 ZBED4O75132 1171 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 CDC45O75419 566 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 HMGCRP04035 888 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 COPB2P35606 906 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 STAT3P40763 770 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 MTFR1Q15390 333 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 CASC1Q6TDU7 716 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 DGKHQ86XP1 1220 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 TRMT44Q8IYL2 757 aaKnown RBP28.15■■■□□ 2.1
LIMD2-207ENST00000579329 CHURC1Q8WUH1 139 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 ZKSCAN3Q9BRR0 538 aa28.15■■■□□ 2.1
LIMD2-207ENST00000579329 STRNO43815 780 aa28.14■■■□□ 2.1
LIMD2-207ENST00000579329 PLA2G6O60733 806 aa28.14■■■□□ 2.1
LIMD2-207ENST00000579329 TRDNQ13061 729 aa28.14■■■□□ 2.1
LIMD2-207ENST00000579329 IKQ13123 557 aaPredicted RBP28.14■■■□□ 2.1
LIMD2-207ENST00000579329 CCDC96Q2M329 555 aa28.14■■■□□ 2.1
LIMD2-207ENST00000579329 CHMP4CQ96CF2 233 aa28.14■■■□□ 2.1
LIMD2-207ENST00000579329 ZSWIM5Q9P217 1185 aa28.14■■■□□ 2.1
LIMD2-207ENST00000579329 RBM8AQ9Y5S9 174 aaKnown RBP28.14■■■□□ 2.1
LIMD2-207ENST00000579329 FDX1P10109 184 aa28.13■■■□□ 2.09
LIMD2-207ENST00000579329 CCL5P13501 91 aa28.13■■■□□ 2.09
LIMD2-207ENST00000579329 KCTD1Q719H9 257 aa28.13■■■□□ 2.09
LIMD2-207ENST00000579329 TRIB2Q92519 343 aa28.13■■■□□ 2.09
LIMD2-207ENST00000579329 ZSCAN10Q96SZ4 725 aaPredicted RBP28.13■■■□□ 2.09
LIMD2-207ENST00000579329 TEX13BQ9BXU2 312 aa28.13■■■□□ 2.09
LIMD2-207ENST00000579329 LSG1Q9H089 658 aaKnown RBP28.13■■■□□ 2.09
LIMD2-207ENST00000579329 SLC38A10Q9HBR0 1119 aa28.13■■■□□ 2.09
LIMD2-207ENST00000579329 ZNF236Q9UL36 1845 aa28.13■■■□□ 2.09
LIMD2-207ENST00000579329 ATP2A1O14983 1001 aa28.12■■■□□ 2.09
LIMD2-207ENST00000579329 ZKSCAN1P17029 563 aaPredicted RBP28.12■■■□□ 2.09
LIMD2-207ENST00000579329 RASGRP2Q7LDG7 609 aa28.12■■■□□ 2.09
LIMD2-207ENST00000579329 UBAC1Q9BSL1 405 aa28.12■■■□□ 2.09
LIMD2-207ENST00000579329 ABRAQ8N0Z2 381 aa28.11■■■□□ 2.09
LIMD2-207ENST00000579329 ANKS1AQ92625 1134 aa28.11■■■□□ 2.09
LIMD2-207ENST00000579329 RNF208Q9H0X6 261 aa28.11■■■□□ 2.09
LIMD2-207ENST00000579329 ANO2Q9NQ90 1003 aa28.11■■■□□ 2.09
LIMD2-207ENST00000579329 HOXC6P09630 235 aa28.1■■■□□ 2.09
LIMD2-207ENST00000579329 ADORA2AP29274 412 aa28.1■■■□□ 2.09
LIMD2-207ENST00000579329 FXR1P51114 621 aaKnown RBP eCLIP28.1■■■□□ 2.09
LIMD2-207ENST00000579329 OAZ1P54368 228 aa28.1■■■□□ 2.09
LIMD2-207ENST00000579329 SNRNP48Q6IEG0 339 aaKnown RBP28.1■■■□□ 2.09
LIMD2-207ENST00000579329 RALYLQ86SE5 291 aaKnown RBP28.1■■■□□ 2.09
LIMD2-207ENST00000579329 CPXCR1Q8N123 301 aa28.1■■■□□ 2.09
LIMD2-207ENST00000579329 UNC93B1Q9H1C4 597 aa28.1■■■□□ 2.09
LIMD2-207ENST00000579329 TRIOBPQ9H2D6 2365 aa28.1■■■□□ 2.09
LIMD2-207ENST00000579329 TNKSO95271 1327 aa28.1■■■□□ 2.09
LIMD2-207ENST00000579329 E7EWF7 191 aa28.09■■■□□ 2.09
LIMD2-207ENST00000579329 PDHBP11177 359 aa28.09■■■□□ 2.09
LIMD2-207ENST00000579329 FCER1AP12319 257 aa28.09■■■□□ 2.09
LIMD2-207ENST00000579329 DPP9Q86TI2 863 aa28.09■■■□□ 2.09
LIMD2-207ENST00000579329 ENAHQ8N8S7 591 aaPredicted RBP28.09■■■□□ 2.09
LIMD2-207ENST00000579329 NCOA7Q8NI08 942 aa28.09■■■□□ 2.09
LIMD2-207ENST00000579329 KAT14Q9H8E8 782 aa28.09■■■□□ 2.09
LIMD2-207ENST00000579329 RAVER2Q9HCJ3 691 aaKnown RBP28.09■■■□□ 2.09
LIMD2-207ENST00000579329 GJB1P08034 283 aa28.08■■■□□ 2.09
LIMD2-207ENST00000579329 CCL14Q16627 93 aa28.08■■■□□ 2.09
LIMD2-207ENST00000579329 MMP19Q99542 508 aa28.08■■■□□ 2.09
LIMD2-207ENST00000579329 SLC5A4Q9NY91 659 aa28.08■■■□□ 2.09
LIMD2-207ENST00000579329 TAF6LQ9Y6J9 622 aa28.08■■■□□ 2.09
LIMD2-207ENST00000579329 SNHG28P0DPA3 235 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 TRIM32Q13049 653 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 KCTD2Q14681 263 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 BTNL9Q6UXG8 535 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 CYB5R4Q7L1T6 521 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 PNMA1Q8ND90 353 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 NPLOC4Q8TAT6 608 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 PRR12Q9ULL5 1215 aa28.07■■■□□ 2.08
LIMD2-207ENST00000579329 FRMPD2Q68DX3 1309 aaPredicted RBP28.07■■■□□ 2.08
LIMD2-207ENST00000579329 ZNF543Q08ER8 600 aa28.06■■■□□ 2.08
LIMD2-207ENST00000579329 STOX1Q6ZVD7 989 aa28.06■■■□□ 2.08
LIMD2-207ENST00000579329 GPCPD1Q9NPB8 672 aa28.06■■■□□ 2.08
LIMD2-207ENST00000579329 COLQQ9Y215 455 aaPredicted RBP28.06■■■□□ 2.08
LIMD2-207ENST00000579329 SLC4A3P48751 1232 aa28.05■■■□□ 2.08
LIMD2-207ENST00000579329 IFIT1BQ5T764 474 aaKnown RBP28.05■■■□□ 2.08
LIMD2-207ENST00000579329 SYDE2Q5VT97 1194 aa28.05■■■□□ 2.08
LIMD2-207ENST00000579329 MFSD14CQ5VZR4 134 aa28.05■■■□□ 2.08
LIMD2-207ENST00000579329 TTBK2Q6IQ55 1244 aa28.05■■■□□ 2.08
LIMD2-207ENST00000579329 RPTORQ8N122 1335 aa28.05■■■□□ 2.08
LIMD2-207ENST00000579329 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.05■■■□□ 2.08
LIMD2-207ENST00000579329 HMX1Q9NP08 348 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-207ENST00000579329 RIPK3Q9Y572 518 aa28.05■■■□□ 2.08
LIMD2-207ENST00000579329 SLC27A2O14975 620 aa28.04■■■□□ 2.08
LIMD2-207ENST00000579329 COBLO75128 1261 aa28.04■■■□□ 2.08
LIMD2-207ENST00000579329 PRKAR2AP13861 404 aaKnown RBP28.04■■■□□ 2.08
LIMD2-207ENST00000579329 GJA8P48165 433 aa28.04■■■□□ 2.08
LIMD2-207ENST00000579329 SEC23AQ15436 765 aa28.04■■■□□ 2.08
LIMD2-207ENST00000579329 GPATCH4Q5T3I0 446 aaKnown RBP28.04■■■□□ 2.08
LIMD2-207ENST00000579329 MAP3K21Q5TCX8 1036 aa28.04■■■□□ 2.08
LIMD2-207ENST00000579329 PAK6Q9NQU5 681 aaPredicted RBP28.04■■■□□ 2.08
LIMD2-207ENST00000579329 FBXO40Q9UH90 709 aa28.04■■■□□ 2.08
LIMD2-207ENST00000579329 SLC16A2P36021 539 aa28.03■■■□□ 2.08
LIMD2-207ENST00000579329 NECTIN1Q15223 517 aa28.03■■■□□ 2.08
LIMD2-207ENST00000579329 CREB3L3Q68CJ9 461 aa28.03■■■□□ 2.08
LIMD2-207ENST00000579329 CHST13Q8NET6 341 aa28.03■■■□□ 2.08
LIMD2-207ENST00000579329 FLRT1Q9NZU1 646 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms