RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 DCDC2CA8MYV0 355 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 CHGBP05060 677 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 FOSL2P15408 326 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 ACLYP53396 1101 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 FPGSQ05932 587 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 MAMDC4Q6UXC1 1216 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
CASC3-206ENST00000579238 LENG1Q96BZ8 264 aaPredicted RBP10.26□□□□□ -0.77
CASC3-206ENST00000579238 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 SLF1Q9BQI6 1058 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 PUS7LQ9H0K6 701 aaKnown RBP10.26□□□□□ -0.77
CASC3-206ENST00000579238 NYAP2Q9P242 653 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 FAM184BQ9ULE4 1060 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 PRUNE2Q8WUY3 3088 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 ATP2A1O14983 1001 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 DUSP11O75319 330 aaKnown RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 SNAI1O95863 264 aaPredicted RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 NDUFB10O96000 172 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 RASA1P20936 1047 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 KCNA10Q16322 511 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 SBK1Q52WX2 424 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 SNRNP48Q6IEG0 339 aaKnown RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 CCSAPQ6IQ19 270 aaPredicted RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 GIMAP6Q6P9H5 292 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
CASC3-206ENST00000579238 PRPF38AQ8NAV1 312 aaKnown RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 NUP88Q99567 741 aaPredicted RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 CHMP4BQ9H444 224 aaKnown RBP10.25□□□□□ -0.77
CASC3-206ENST00000579238 MKNK2Q9HBH9 465 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 COG6Q9Y2V7 657 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 RIPK3Q9Y572 518 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 MROH7Q68CQ1 1323 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 PLXNA1Q9UIW2 1896 aa10.25□□□□□ -0.77
CASC3-206ENST00000579238 F5H6K3 240 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 ZBED4O75132 1171 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 TIMP1P01033 207 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 DNAJB2P25686 324 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 CST5P28325 142 aaPredicted RBP10.24□□□□□ -0.77
CASC3-206ENST00000579238 KLRC3Q07444 240 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 PCSK9Q8NBP7 692 aaKnown RBP10.24□□□□□ -0.77
CASC3-206ENST00000579238 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
CASC3-206ENST00000579238 GLT1D1Q96MS3 346 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 STRBPQ96SI9 672 aaKnown RBP10.24□□□□□ -0.77
CASC3-206ENST00000579238 SPC25Q9HBM1 224 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 ZHX1Q9UKY1 873 aaPredicted RBP10.24□□□□□ -0.77
CASC3-206ENST00000579238 TBX21Q9UL17 535 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 CTDP1Q9Y5B0 961 aaPredicted RBP10.24□□□□□ -0.77
CASC3-206ENST00000579238 ELP1O95163 1332 aa10.24□□□□□ -0.77
CASC3-206ENST00000579238 GREB1LQ9C091 1923 aaPredicted RBP10.23□□□□□ -0.77
CASC3-206ENST00000579238 IGKV6D-41A0A0C4DH26 115 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 MYADML2A6NDP7 307 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 GSG1L2A8MUP6 293 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 C6orf222P0C671 652 aaPredicted RBP10.23□□□□□ -0.77
CASC3-206ENST00000579238 CDK7P50613 346 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 PPIGQ13427 754 aaKnown RBP eCLIP10.23□□□□□ -0.77
CASC3-206ENST00000579238 ACVR2BQ13705 512 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 GRIN2CQ14957 1233 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 MFSD5Q6N075 450 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 CCDC174Q6PII3 467 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 CPXCR1Q8N123 301 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 TIFAQ96CG3 184 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 UPF3AQ9H1J1 476 aaKnown RBP10.23□□□□□ -0.77
CASC3-206ENST00000579238 ABHD16BQ9H3Z7 469 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 SLC38A10Q9HBR0 1119 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
CASC3-206ENST00000579238 CLIP2Q9UDT6 1046 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 FBXO40Q9UH90 709 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 FEM1BQ9UK73 627 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 SYNPO2Q9UMS6 1093 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 MYH7P12883 1935 aa10.23□□□□□ -0.77
CASC3-206ENST00000579238 A0A0U1RQG5 324 aaPredicted RBP10.22□□□□□ -0.77
CASC3-206ENST00000579238 MINDY4BA8MYZ0 360 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 ARVCFO00192 962 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 ASGR1P07306 291 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 OAZ1P54368 228 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 GJA9P57773 515 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 CCDC144BQ3MJ40 725 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 TMEM240Q5SV17 173 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 ZNF444Q8N0Y2 327 aaPredicted RBP10.22□□□□□ -0.77
CASC3-206ENST00000579238 STK11IPQ8N1F8 1099 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 ANKRD35Q8N283 1001 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 KBTBD3Q8NAB2 608 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 CHST13Q8NET6 341 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 APPBP2Q92624 585 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 OSBP2Q969R2 916 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 MKL1Q969V6 931 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 VTI1AQ96AJ9 217 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 FGD4Q96M96 766 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■□□□□ 8.6
CASC3-206ENST00000579238 ZNF576Q9H609 170 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 ZNF287Q9HBT7 754 aa10.22□□□□□ -0.77
CASC3-206ENST00000579238 RAVER2Q9HCJ3 691 aaKnown RBP10.22□□□□□ -0.77
CASC3-206ENST00000579238 PRDM6Q9NQX0 595 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms