RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 SLFN13Q68D06 897 aa17.72■□□□□ 0.43
MKS1-205ENST00000577315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
MKS1-205ENST00000577315 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
MKS1-205ENST00000577315 TINF2Q9BSI4 451 aa17.72■□□□□ 0.43
MKS1-205ENST00000577315 FBXO40Q9UH90 709 aa17.72■□□□□ 0.43
MKS1-205ENST00000577315 ANAPC4Q9UJX5 808 aa17.72■□□□□ 0.43
MKS1-205ENST00000577315 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 PGK2P07205 417 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 SYN1P17600 705 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 MCMDC2Q4G0Z9 681 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 FAM47AQ5JRC9 791 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 CCDC129Q6ZRS4 1044 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 FAM160B2Q86V87 743 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 SMC5Q8IY18 1101 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 CHST13Q8NET6 341 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 CHURC1Q8WUH1 139 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 SLC38A10Q9HBR0 1119 aa17.71■□□□□ 0.43
MKS1-205ENST00000577315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
MKS1-205ENST00000577315 RARBP10826 455 aa17.7■□□□□ 0.42
MKS1-205ENST00000577315 PRAMEF19Q5SWL8 479 aa17.7■□□□□ 0.42
MKS1-205ENST00000577315 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
MKS1-205ENST00000577315 CPXCR1Q8N123 301 aa17.7■□□□□ 0.42
MKS1-205ENST00000577315 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
MKS1-205ENST00000577315 KIFC2Q96AC6 838 aa17.7■□□□□ 0.42
MKS1-205ENST00000577315 GMCL1Q96IK5 515 aa17.7■□□□□ 0.42
MKS1-205ENST00000577315 CNPY2Q9Y2B0 182 aa17.7■□□□□ 0.42
MKS1-205ENST00000577315 TRIM6-TRIM34B2RNG4 842 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 FOXP2O15409 715 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 ORC4O43929 436 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 PLA2G6O60733 806 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 SLC1A4P43007 532 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 MAGEA10P43363 369 aaPredicted RBP17.69■□□□□ 0.42
MKS1-205ENST00000577315 STAT2P52630 851 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
MKS1-205ENST00000577315 CTDSPL2Q05D32 466 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 ZNF467Q7Z7K2 595 aaPredicted RBP17.69■□□□□ 0.42
MKS1-205ENST00000577315 LNPKQ9C0E8 428 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 STX8Q9UNK0 236 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 RANBP2P49792 3224 aaKnown RBP17.69■□□□□ 0.42
MKS1-205ENST00000577315 ZMYM6O95789 1325 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 SYNGAP1Q96PV0 1343 aa17.69■□□□□ 0.42
MKS1-205ENST00000577315 TMEM232C9JQI7 657 aa17.68■□□□□ 0.42
MKS1-205ENST00000577315 RANBP6O60518 1105 aaKnown RBP17.68■□□□□ 0.42
MKS1-205ENST00000577315 FGRP09769 529 aa17.68■□□□□ 0.42
MKS1-205ENST00000577315 AKR1A1P14550 325 aa17.68■□□□□ 0.42
MKS1-205ENST00000577315 LRRC41Q15345 812 aa17.68■□□□□ 0.42
MKS1-205ENST00000577315 MAMDC4Q6UXC1 1216 aa17.68■□□□□ 0.42
MKS1-205ENST00000577315 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
MKS1-205ENST00000577315 RAVER2Q9HCJ3 691 aaKnown RBP17.68■□□□□ 0.42
MKS1-205ENST00000577315 ISY1Q9ULR0 285 aaKnown RBP17.68■□□□□ 0.42
MKS1-205ENST00000577315 RIPK3Q9Y572 518 aa17.68■□□□□ 0.42
MKS1-205ENST00000577315 DNAJC25-GNG10A0A024R161 153 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 PCP11498 1178 aaKnown RBP17.67■□□□□ 0.42
MKS1-205ENST00000577315 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 RTP1P59025 263 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 IKQ13123 557 aaPredicted RBP17.67■□□□□ 0.42
MKS1-205ENST00000577315 TKFCQ3LXA3 575 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 VPS53Q5VIR6 699 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 C1orf53Q5VUE5 145 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 RCSD1Q6JBY9 416 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 GPR153Q6NV75 609 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 SLC39A5Q6ZMH5 540 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 RNF180Q86T96 592 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 TDHQ8IZJ6 230 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 LBHD1Q9BQE6 289 aaPredicted RBP17.67■□□□□ 0.42
MKS1-205ENST00000577315 UBE2OQ9C0C9 1292 aaKnown RBP17.67■□□□□ 0.42
MKS1-205ENST00000577315 OSBPL3Q9H4L5 887 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 XPNPEP3Q9NQH7 507 aa17.67■□□□□ 0.42
MKS1-205ENST00000577315 A0A0D9SFI3 127 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 FGAP02671 866 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 ZNF865P0CJ78 1059 aaPredicted RBP17.66■□□□□ 0.42
MKS1-205ENST00000577315 HSPD1P10809 573 aaKnown RBP17.66■□□□□ 0.42
MKS1-205ENST00000577315 NOVP48745 357 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 ATN1P54259 1190 aaPredicted RBP17.66■□□□□ 0.42
MKS1-205ENST00000577315 LRIT3Q3SXY7 679 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 FAM227BQ96M60 508 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 ACAD9Q9H845 621 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 IL17RBQ9NRM6 502 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 FAM184BQ9ULE4 1060 aa17.66■□□□□ 0.42
MKS1-205ENST00000577315 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
MKS1-205ENST00000577315 MCCP23508 829 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 NT5C2P49902 561 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 NUCB1Q02818 461 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
MKS1-205ENST00000577315 SNX17Q15036 470 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 B4GALNT3Q6L9W6 998 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 DCAF4Q8WV16 495 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 TOMM22Q9NS69 142 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 PHF24Q9UPV7 400 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
MKS1-205ENST00000577315 LAMA4Q16363 1823 aa17.64■□□□□ 0.41
MKS1-205ENST00000577315 HIP1O00291 1037 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms