RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 NKX2-3Q8TAU0 364 aa27.64■■■□□ 2.02
SNF8-217ENST00000576353 ZKSCAN3Q9BRR0 538 aa27.64■■■□□ 2.02
SNF8-217ENST00000576353 TEX13BQ9BXU2 312 aa27.64■■■□□ 2.02
SNF8-217ENST00000576353 RNF208Q9H0X6 261 aa27.64■■■□□ 2.02
SNF8-217ENST00000576353 MTMR7Q9Y216 660 aa27.64■■■□□ 2.02
SNF8-217ENST00000576353 DOCK3Q8IZD9 2030 aa27.63■■■□□ 2.01
SNF8-217ENST00000576353 ATP2A1O14983 1001 aa27.63■■■□□ 2.01
SNF8-217ENST00000576353 ZKSCAN1P17029 563 aaPredicted RBP27.63■■■□□ 2.01
SNF8-217ENST00000576353 KCTD1Q719H9 257 aa27.63■■■□□ 2.01
SNF8-217ENST00000576353 ABRAQ8N0Z2 381 aa27.63■■■□□ 2.01
SNF8-217ENST00000576353 CHMP4CQ96CF2 233 aa27.63■■■□□ 2.01
SNF8-217ENST00000576353 ZSCAN10Q96SZ4 725 aaPredicted RBP27.63■■■□□ 2.01
SNF8-217ENST00000576353 SLC38A10Q9HBR0 1119 aa27.63■■■□□ 2.01
SNF8-217ENST00000576353 A0A0G2JMZ2 1700 aa27.63■■■□□ 2.01
SNF8-217ENST00000576353 HOXC6P09630 235 aa27.62■■■□□ 2.01
SNF8-217ENST00000576353 FCER1AP12319 257 aa27.62■■■□□ 2.01
SNF8-217ENST00000576353 CCDC96Q2M329 555 aa27.62■■■□□ 2.01
SNF8-217ENST00000576353 TRIB2Q92519 343 aa27.62■■■□□ 2.01
SNF8-217ENST00000576353 UBAC1Q9BSL1 405 aa27.62■■■□□ 2.01
SNF8-217ENST00000576353 UNC93B1Q9H1C4 597 aa27.62■■■□□ 2.01
SNF8-217ENST00000576353 SLC5A4Q9NY91 659 aa27.62■■■□□ 2.01
SNF8-217ENST00000576353 RBM8AQ9Y5S9 174 aaKnown RBP27.62■■■□□ 2.01
SNF8-217ENST00000576353 CDC45O75419 566 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 GJB1P08034 283 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 ADORA2AP29274 412 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 OAZ1P54368 228 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 SNRNP48Q6IEG0 339 aaKnown RBP27.61■■■□□ 2.01
SNF8-217ENST00000576353 DPP9Q86TI2 863 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 CPXCR1Q8N123 301 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 ANKS1AQ92625 1134 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 LAMA4Q16363 1823 aa27.61■■■□□ 2.01
SNF8-217ENST00000576353 EN2P19622 333 aaPredicted RBP27.6■■■□□ 2.01
SNF8-217ENST00000576353 LSG1Q9H089 658 aaKnown RBP27.6■■■□□ 2.01
SNF8-217ENST00000576353 KAT14Q9H8E8 782 aa27.6■■■□□ 2.01
SNF8-217ENST00000576353 RAVER2Q9HCJ3 691 aaKnown RBP27.59■■■□□ 2.01
SNF8-217ENST00000576353 PARP14Q460N5 1801 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 PDHBP11177 359 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 KCTD2Q14681 263 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 CCL14Q16627 93 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 RALYLQ86SE5 291 aaKnown RBP27.58■■■□□ 2.01
SNF8-217ENST00000576353 ENAHQ8N8S7 591 aaPredicted RBP27.58■■■□□ 2.01
SNF8-217ENST00000576353 NCOA7Q8NI08 942 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 MMP19Q99542 508 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 HMX1Q9NP08 348 aaPredicted RBP27.58■■■□□ 2.01
SNF8-217ENST00000576353 ANO2Q9NQ90 1003 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 RPTORQ8N122 1335 aa27.58■■■□□ 2.01
SNF8-217ENST00000576353 CENPFP49454 3210 aa27.57■■■□□ 2
SNF8-217ENST00000576353 E7EWF7 191 aa27.57■■■□□ 2
SNF8-217ENST00000576353 CAPN2P17655 700 aa27.57■■■□□ 2
SNF8-217ENST00000576353 GJA8P48165 433 aa27.57■■■□□ 2
SNF8-217ENST00000576353 MFSD14CQ5VZR4 134 aa27.57■■■□□ 2
SNF8-217ENST00000576353 BTNL9Q6UXG8 535 aa27.57■■■□□ 2
SNF8-217ENST00000576353 RASGRP2Q7LDG7 609 aa27.57■■■□□ 2
SNF8-217ENST00000576353 PNMA1Q8ND90 353 aa27.57■■■□□ 2
SNF8-217ENST00000576353 PRR12Q9ULL5 1215 aa27.57■■■□□ 2
SNF8-217ENST00000576353 TNKSO95271 1327 aa27.57■■■□□ 2
SNF8-217ENST00000576353 KIAA0100Q14667 2235 aaKnown RBP27.57■■■□□ 2
SNF8-217ENST00000576353 PLXNB2O15031 1838 aa27.57■■■□□ 2
SNF8-217ENST00000576353 SNHG28P0DPA3 235 aa27.56■■■□□ 2
SNF8-217ENST00000576353 SLC4A3P48751 1232 aa27.56■■■□□ 2
SNF8-217ENST00000576353 TRIM32Q13049 653 aa27.56■■■□□ 2
SNF8-217ENST00000576353 MAP3K21Q5TCX8 1036 aa27.56■■■□□ 2
SNF8-217ENST00000576353 NPLOC4Q8TAT6 608 aa27.56■■■□□ 2
SNF8-217ENST00000576353 GPCPD1Q9NPB8 672 aa27.56■■■□□ 2
SNF8-217ENST00000576353 PAK6Q9NQU5 681 aaPredicted RBP27.56■■■□□ 2
SNF8-217ENST00000576353 FBXO40Q9UH90 709 aa27.56■■■□□ 2
SNF8-217ENST00000576353 COBLO75128 1261 aa27.55■■■□□ 2
SNF8-217ENST00000576353 PRKAR2AP13861 404 aaKnown RBP27.55■■■□□ 2
SNF8-217ENST00000576353 ZNF543Q08ER8 600 aa27.55■■■□□ 2
SNF8-217ENST00000576353 GPATCH4Q5T3I0 446 aaKnown RBP27.55■■■□□ 2
SNF8-217ENST00000576353 TTBK2Q6IQ55 1244 aa27.55■■■□□ 2
SNF8-217ENST00000576353 CYB5R4Q7L1T6 521 aa27.55■■■□□ 2
SNF8-217ENST00000576353 U2AF1L4Q8WU68 220 aaKnown RBP27.55■■■□□ 2
SNF8-217ENST00000576353 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.55■■■□□ 2
SNF8-217ENST00000576353 RIPK3Q9Y572 518 aa27.55■■■□□ 2
SNF8-217ENST00000576353 FRMPD2Q68DX3 1309 aaPredicted RBP27.55■■■□□ 2
SNF8-217ENST00000576353 SGPL1O95470 568 aa27.54■■■□□ 2
SNF8-217ENST00000576353 CACNB2Q08289 660 aaPredicted RBP27.54■■■□□ 2
SNF8-217ENST00000576353 IFIT1BQ5T764 474 aaKnown RBP27.54■■■□□ 2
SNF8-217ENST00000576353 OLFML2BQ68BL8 750 aa27.54■■■□□ 2
SNF8-217ENST00000576353 CHST13Q8NET6 341 aa27.54■■■□□ 2
SNF8-217ENST00000576353 DEFB118Q96PH6 123 aa27.54■■■□□ 2
SNF8-217ENST00000576353 FLRT1Q9NZU1 646 aa27.54■■■□□ 2
SNF8-217ENST00000576353 TAF6LQ9Y6J9 622 aa27.54■■■□□ 2
SNF8-217ENST00000576353 ERICH2A1L162 156 aa27.53■■■□□ 2
SNF8-217ENST00000576353 SLC16A2P36021 539 aa27.53■■■□□ 2
SNF8-217ENST00000576353 SYDE2Q5VT97 1194 aa27.53■■■□□ 2
SNF8-217ENST00000576353 SART3Q15020 963 aaKnown RBP27.52■■■□□ 2
SNF8-217ENST00000576353 NECTIN1Q15223 517 aa27.52■■■□□ 2
SNF8-217ENST00000576353 SEC23AQ15436 765 aa27.52■■■□□ 2
SNF8-217ENST00000576353 TKFCQ3LXA3 575 aa27.52■■■□□ 2
SNF8-217ENST00000576353 STOX1Q6ZVD7 989 aa27.52■■■□□ 2
SNF8-217ENST00000576353 DDX11Q96FC9 970 aa27.52■■■□□ 2
SNF8-217ENST00000576353 DIS3Q9Y2L1 958 aaKnown RBP27.52■■■□□ 2
SNF8-217ENST00000576353 RBBP6Q7Z6E9 1792 aaKnown RBP27.52■■■□□ 2
SNF8-217ENST00000576353 ZNF536O15090 1300 aa27.51■■□□□ 1.99
SNF8-217ENST00000576353 IFIT3O14879 490 aaKnown RBP27.51■■□□□ 1.99
SNF8-217ENST00000576353 SLC27A2O14975 620 aa27.51■■□□□ 1.99
SNF8-217ENST00000576353 RNF20Q5VTR2 975 aa27.51■■□□□ 1.99
SNF8-217ENST00000576353 CREB3L3Q68CJ9 461 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms