RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 BPIFB4P59827 614 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 CCDC25Q86WR0 208 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 VSTM4Q8IW00 320 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 FAM89AQ96GI7 184 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 DIS3Q9Y2L1 958 aaKnown RBP13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 HPDP32754 393 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 PCK1P35558 622 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 TXKP42681 527 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 WHAMMQ8TF30 809 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 MCUR1Q96AQ8 359 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 PBKQ96KB5 322 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 THAP9Q9H5L6 903 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 FANCLQ9NW38 375 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 RWDD2AQ9UIY3 292 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 RABGAP1Q9Y3P9 1069 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 SETSIPP0DME0 302 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 RXRAP19793 462 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 CTNNA1P35221 906 aaKnown RBP13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 RRAGAQ7L523 313 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 ATP2A3Q93084 1043 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 ASIC3Q9UHC3 531 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 GMNNO75496 209 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 LMNB1P20700 586 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 SEPT6Q14141 434 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 EMBQ6PCB8 327 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 KRT26Q7Z3Y9 468 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 C2CD5Q86YS7 1000 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 COMMD10Q9Y6G5 202 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 NDUFA8P51970 172 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 CLNS1AP54105 237 aaKnown RBP13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 SCRN1Q12765 414 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 STRN3Q13033 797 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 NECTIN1Q15223 517 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 OSBPL5Q9H0X9 879 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 GGA1Q9UJY5 639 aa13.65□□□□□ -0.22
PCDHGA9-201ENST00000573521 FGAP02671 866 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 GNGT1P63211 74 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 TSPOAP1O95153 1857 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 ANO9A1A5B4 782 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 PHKG2P15735 406 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 GAP43P17677 238 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 CCHCR1Q8TD31 782 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 PCDHA5Q9Y5H7 936 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 USP6P35125 1406 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 GOLGA8QA0A0J9YX86 632 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 GOLGA8OA6NCC3 632 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 GOLGA8NF8WBI6 632 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 UNC13BO14795 1591 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 ZBED6P86452 979 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 RESTQ13127 1097 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 LONRF2Q1L5Z9 754 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 CEP85LQ5SZL2 805 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 ZNF658Q5TYW1 1059 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 ANKRD20A3Q5VUR7 823 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 TRIM42Q8IWZ5 723 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 PHKBQ93100 1093 aa13.64□□□□□ -0.23
PCDHGA9-201ENST00000573521 TMEM110-MUSTN1A8MSY1 372 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 HIP1RO75146 1068 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 SARNPP82979 210 aaKnown RBP13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 CCDC105Q8IYK2 499 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 E7EVH7 732 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 EXOC3O60645 756 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 KIF23Q02241 960 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 CHURC1Q8WUH1 139 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 MYCBPQ99417 103 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 SRPRBQ9Y5M8 271 aaKnown RBP13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 APOA5Q6Q788 366 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 BCAS4Q8TDM0 211 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 MAN2A1Q16706 1144 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 HAUS1Q96CS2 278 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 PYCARDQ9ULZ3 195 aa13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 NSFL1CQ9UNZ2 370 aaKnown RBP13.63□□□□□ -0.23
PCDHGA9-201ENST00000573521 PASKQ96RG2 1323 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 P4HA1P13674 534 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 ADKP55263 362 aaKnown RBP13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 VPS52Q8N1B4 723 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.232e-7■■■■■ 61.7
PCDHGA9-201ENST00000573521 MAP3K4Q9Y6R4 1608 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 TOM1O60784 492 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 ITIH3Q06033 890 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 OTUD6AQ7L8S5 288 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms