RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 ASTN1O14525 1302 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 PGK1P00558 417 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 NOVP48745 357 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 CDK7P50613 346 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 ANKRD33Q7Z3H0 272 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 APPBP2Q92624 585 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 FERMT2Q96AC1 680 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 SH2D4AQ9H788 454 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 SLC38A10Q9HBR0 1119 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
ABR-220ENST00000573325 ATP11BQ9Y2G3 1177 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
ABR-220ENST00000573325 ZNF536O15090 1300 aa13.17□□□□□ -0.3
ABR-220ENST00000573325 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
ABR-220ENST00000573325 PLS1Q14651 629 aa13.17□□□□□ -0.3
ABR-220ENST00000573325 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
ABR-220ENST00000573325 MMP19Q99542 508 aa13.17□□□□□ -0.3
ABR-220ENST00000573325 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
ABR-220ENST00000573325 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
ABR-220ENST00000573325 MYH8P13535 1937 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
ABR-220ENST00000573325 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 RNF113AO15541 343 aaKnown RBP13.16□□□□□ -0.3
ABR-220ENST00000573325 GPAA1O43292 621 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 CST5P28325 142 aaPredicted RBP13.16□□□□□ -0.3
ABR-220ENST00000573325 RASIP1Q5U651 963 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
ABR-220ENST00000573325 MSL3Q8N5Y2 521 aaKnown RBP13.16□□□□□ -0.3
ABR-220ENST00000573325 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 SLF1Q9BQI6 1058 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
ABR-220ENST00000573325 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
ABR-220ENST00000573325 XPNPEP3Q9NQH7 507 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
ABR-220ENST00000573325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
ABR-220ENST00000573325 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 PLXNA1Q9UIW2 1896 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 TRANK1O15050 2925 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
ABR-220ENST00000573325 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
ABR-220ENST00000573325 GMCL1P1Q8NEA9 526 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
ABR-220ENST00000573325 TSEN34Q9BSV6 310 aaKnown RBP13.15□□□□□ -0.3
ABR-220ENST00000573325 COL25A1Q9BXS0 654 aaPredicted RBP13.15□□□□□ -0.3
ABR-220ENST00000573325 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 SLC5A4Q9NY91 659 aa13.15□□□□□ -0.3
ABR-220ENST00000573325 PATL2C9JE40 543 aaKnown RBP13.14□□□□□ -0.31
ABR-220ENST00000573325 PRDM1O75626 825 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 ACLYP53396 1101 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 KCTD2Q14681 263 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 ZMYM1Q5SVZ6 1142 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
ABR-220ENST00000573325 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
ABR-220ENST00000573325 DUSP11O75319 330 aaKnown RBP13.13□□□□□ -0.31
ABR-220ENST00000573325 FGRP09769 529 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 RARBP10826 455 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 AKR1A1P14550 325 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 PTGS1P23219 599 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 COPB2P35606 906 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 SNRNP48Q6IEG0 339 aaKnown RBP13.13□□□□□ -0.31
ABR-220ENST00000573325 RASGRP2Q7LDG7 609 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 SLC43A3Q8NBI5 491 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 RAVER2Q9HCJ3 691 aaKnown RBP13.13□□□□□ -0.31
ABR-220ENST00000573325 INCENPQ9NQS7 918 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
ABR-220ENST00000573325 SOWAHBA6NEL2 793 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 PLA2G6O60733 806 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
ABR-220ENST00000573325 CLTBP09497 229 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 OAZ1P54368 228 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 GJA9P57773 515 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 KCNA10Q16322 511 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 TMEM63BQ5T3F8 832 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
ABR-220ENST00000573325 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
ABR-220ENST00000573325 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
ABR-220ENST00000573325 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
ABR-220ENST00000573325 MCM3APO60318 1980 aa13.12□□□□□ -0.31
ABR-220ENST00000573325 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 MINDY4BA8MYZ0 360 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 CD4P01730 458 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms