RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 ZNF543Q08ER8 600 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 IRF5Q13568 498 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 PLS1Q14651 629 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 PLEKHH3Q7Z736 793 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 RALYLQ86SE5 291 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 FAM160B2Q86V87 743 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 RIOX2Q8IUF8 465 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 CPXCR1Q8N123 301 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 NEK1Q96PY6 1258 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 UBAC1Q9BSL1 405 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 UBA5Q9GZZ9 404 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 CPVLQ9H3G5 476 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 KAT14Q9H8E8 782 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 RAVER2Q9HCJ3 691 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 SNX14Q9Y5W7 946 aa10.2□□□□□ -0.78
TRAPPC1-203ENST00000571739 EPB41L2O43491 1005 aaKnown RBP10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 PRC1O43663 620 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 ZBED4O75132 1171 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 REC8O95072 547 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 CYP2B6P20813 491 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 MCM5P33992 734 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 TROAPQ12815 778 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 CCDC96Q2M329 555 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 RNF20Q5VTR2 975 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 NCAPG2Q86XI2 1143 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 STAG2Q8N3U4 1231 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 SHCBP1Q8NEM2 672 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 RAET1EQ8TD07 263 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 SH3TC2Q8TF17 1288 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 ARMC5Q96C12 935 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 NUDT12Q9BQG2 462 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 MTA3Q9BTC8 594 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 LRRC2Q9BYS8 371 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 LY9Q9HBG7 655 aa10.19□□□□□ -0.78
TRAPPC1-203ENST00000571739 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 SLC15A5A6NIM6 579 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 SH2B2O14492 632 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 STRNO43815 780 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 ADCY3O60266 1144 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 COBLO75128 1261 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 SLC25A27O95847 323 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 FDX1P10109 184 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 CPA1P15085 419 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 ELNP15502 786 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 GRK4P32298 578 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 GRB14Q14449 540 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 WTAPQ15007 396 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 SLC35G1Q2M3R5 365 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 TMEM67Q5HYA8 995 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 SYDE2Q5VT97 1194 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 WDR78Q5VTH9 848 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 DHX32Q7L7V1 743 aaKnown RBP10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 CCAR1Q8IX12 1150 aaKnown RBP10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 NPLOC4Q8TAT6 608 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 PXYLP1Q8TE99 480 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 TMEM87BQ96K49 555 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 AGBL1Q96MI9 1066 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 TCEANC2Q96MN5 208 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 RANBP17Q9H2T7 1088 aaKnown RBP10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 MROH8Q9H579 483 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 MAD2L2Q9UI95 211 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 ISY1Q9ULR0 285 aaKnown RBP10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 PLXNB2O15031 1838 aa10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 COL11A1P12107 1806 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC1-203ENST00000571739 SMCHD1A6NHR9 2005 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 A0A0G2JMZ2 1700 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 ERICH2A1L162 156 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 CCDC85CA6NKD9 419 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 IGHA2P01877 340 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 ZKSCAN1P17029 563 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 TAL1P17542 331 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 LIFRP42702 1097 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 SLC4A3P48751 1232 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 OAZ1P54368 228 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 TRIM32Q13049 653 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 IKQ13123 557 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 MTFR1Q15390 333 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 CCL14Q16627 93 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 SLC9C1Q4G0N8 1177 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 GPATCH4Q5T3I0 446 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 SNRNP48Q6IEG0 339 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 NBPF11Q86T75 865 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 TMTC2Q8N394 836 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 ZNF333Q96JL9 665 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 TEX13BQ9BXU2 312 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 FLRT1Q9NZU1 646 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
TRAPPC1-203ENST00000571739 KLRF2D3W0D1 207 aa10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 CYTH3O43739 400 aa10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 HOXC6P09630 235 aa10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 PARP1P09874 1014 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 ADORA2AP29274 412 aa10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 KRT32Q14532 448 aa10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 GRM4Q14833 912 aa10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 SART3Q15020 963 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 C8orf34Q49A92 452 aa10.16□□□□□ -0.78
TRAPPC1-203ENST00000571739 ASPRV1Q53RT3 343 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms