RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 ARVCFO00192 962 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 BCAR3O75815 825 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 C6orf222P0C671 652 aaPredicted RBP13.69□□□□□ -0.22
CHMP6-202ENST00000571457 MAMDC4Q6UXC1 1216 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 HERVK_113Q902F9 699 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 GOPCQ9HD26 462 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 DCP1AQ9NPI6 582 aaPredicted RBP13.69□□□□□ -0.22
CHMP6-202ENST00000571457 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
CHMP6-202ENST00000571457 ZNF214Q9UL59 606 aaPredicted RBP13.69□□□□□ -0.22
CHMP6-202ENST00000571457 PPP1R9AQ9ULJ8 1098 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 ARIH1Q9Y4X5 557 aaPredicted RBP13.69□□□□□ -0.22
CHMP6-202ENST00000571457 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
CHMP6-202ENST00000571457 MYH8P13535 1937 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 ASGR1P07306 291 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 ACRP10323 421 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 AKR1B1P15121 316 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 PDE6AP16499 860 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
CHMP6-202ENST00000571457 ZNF467Q7Z7K2 595 aaPredicted RBP13.68□□□□□ -0.22
CHMP6-202ENST00000571457 ERC1Q8IUD2 1116 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 TEX13BQ9BXU2 312 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 KANSL2Q9H9L4 492 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
CHMP6-202ENST00000571457 COL11A1P12107 1806 aaPredicted RBP13.68□□□□□ -0.22
CHMP6-202ENST00000571457 MUC6Q6W4X9 2439 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
CHMP6-202ENST00000571457 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
CHMP6-202ENST00000571457 FGBP02675 491 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 CYP2D6P10635 497 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 GJA9P57773 515 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 EVX2Q03828 476 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 ACVR2BQ13705 512 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 GNASQ5JWF2 1037 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 CLEC10AQ8IUN9 316 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 FAM126BQ8IXS8 530 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 DYNLL2Q96FJ2 89 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 NKX2-4Q9H2Z4 354 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 ABHD16BQ9H3Z7 469 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 ATP8A2Q9NTI2 1148 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
CHMP6-202ENST00000571457 ZNF532Q9HCE3 1301 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 XIRP2A4UGR9 3374 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 MYADML2A6NDP7 307 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 RAD21O60216 631 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 BMP1P13497 986 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
CHMP6-202ENST00000571457 CYP2C18P33260 490 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
CHMP6-202ENST00000571457 AACSQ86V21 672 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 REPS2Q8NFH8 660 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
CHMP6-202ENST00000571457 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
CHMP6-202ENST00000571457 DNAJC25-GNG10A0A024R161 153 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 CABYRO75952 493 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 CD4P01730 458 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 CDK8P49336 464 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 CCDC144BQ3MJ40 725 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 ZKSCAN2Q63HK3 967 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 RPUSD2Q8IZ73 545 aaKnown RBP13.65□□□□□ -0.22
CHMP6-202ENST00000571457 LCORLQ8N3X6 602 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 SEZ6LQ9BYH1 1024 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 HIPK3Q9H422 1215 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.65□□□□□ -0.22
CHMP6-202ENST00000571457 TNNQ9UQP3 1299 aa13.65□□□□□ -0.22
CHMP6-202ENST00000571457 PRRC2BQ5JSZ5 2229 aaKnown RBP13.65□□□□□ -0.22
CHMP6-202ENST00000571457 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
CHMP6-202ENST00000571457 ERC2O15083 957 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 C12orf60Q5U649 245 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 PPP2R2DQ66LE6 453 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 MICALL1Q8N3F8 863 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
CHMP6-202ENST00000571457 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 FBXO40Q9UH90 709 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
CHMP6-202ENST00000571457 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
CHMP6-202ENST00000571457 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 SLC4A7Q9Y6M7 1214 aa13.64□□□□□ -0.23
CHMP6-202ENST00000571457 TCRBV5S4A2TA0A5A2 114 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 GOLIM4O00461 696 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 GTPBP6O43824 516 aaPredicted RBP13.63□□□□□ -0.23
CHMP6-202ENST00000571457 ZBED4O75132 1171 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 NKX3-2P78367 333 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
CHMP6-202ENST00000571457 HSP90AB4PQ58FF6 505 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 ANKRD35Q8N283 1001 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHMP6-202ENST00000571457 NECAB3Q96P71 396 aaPredicted RBP13.63□□□□□ -0.23
CHMP6-202ENST00000571457 ARMT1Q9H993 441 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms