RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 ABRAQ8N0Z2 381 aa8.84□□□□□ -0.99
SMG6-205ENST00000570659 AGBL1Q96MI9 1066 aa8.84□□□□□ -0.99
SMG6-205ENST00000570659 MMP19Q99542 508 aa8.84□□□□□ -0.99
SMG6-205ENST00000570659 NUP88Q99567 741 aaPredicted RBP8.84□□□□□ -0.99
SMG6-205ENST00000570659 NOC4LQ9BVI4 516 aaKnown RBP8.84□□□□□ -0.99
SMG6-205ENST00000570659 EHD4Q9H223 541 aa8.84□□□□□ -0.99
SMG6-205ENST00000570659 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
SMG6-205ENST00000570659 MSRAQ9UJ68 235 aa8.84□□□□□ -0.99
SMG6-205ENST00000570659 DBNLQ9UJU6 430 aaKnown RBP8.84□□□□□ -0.99
SMG6-205ENST00000570659 CFAP54Q96N23 3096 aa8.84□□□□□ -0.99
SMG6-205ENST00000570659 C5orf42Q9H799 3197 aa8.83□□□□□ -1
SMG6-205ENST00000570659 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
SMG6-205ENST00000570659 B4GALT4O60513 344 aa8.83□□□□□ -1
SMG6-205ENST00000570659 FLOT1O75955 427 aa8.83□□□□□ -1
SMG6-205ENST00000570659 FCER1AP12319 257 aa8.83□□□□□ -1
SMG6-205ENST00000570659 AKR1A1P14550 325 aa8.83□□□□□ -1
SMG6-205ENST00000570659 USP14P54578 494 aa8.83□□□□□ -1
SMG6-205ENST00000570659 TAP1Q03518 808 aa8.83□□□□□ -1
SMG6-205ENST00000570659 GRB10Q13322 594 aa8.83□□□□□ -1
SMG6-205ENST00000570659 RAB30Q15771 203 aa8.83□□□□□ -1
SMG6-205ENST00000570659 PSRC1Q6PGN9 363 aaPredicted RBP8.83□□□□□ -1
SMG6-205ENST00000570659 CXCL17Q6UXB2 119 aa8.83□□□□□ -1
SMG6-205ENST00000570659 RIOX2Q8IUF8 465 aa8.83□□□□□ -1
SMG6-205ENST00000570659 MAGEB6Q8N7X4 407 aa8.83□□□□□ -1
SMG6-205ENST00000570659 SLC43A3Q8NBI5 491 aa8.83□□□□□ -1
SMG6-205ENST00000570659 FBXL18Q96ME1 805 aa8.83□□□□□ -1
SMG6-205ENST00000570659 TSEN34Q9BSV6 310 aaKnown RBP8.83□□□□□ -1
SMG6-205ENST00000570659 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.83□□□□□ -1
SMG6-205ENST00000570659 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
SMG6-205ENST00000570659 UPF3AQ9H1J1 476 aaKnown RBP8.83□□□□□ -1
SMG6-205ENST00000570659 MROH8Q9H579 483 aa8.83□□□□□ -1
SMG6-205ENST00000570659 ZHX1Q9UKY1 873 aaPredicted RBP8.83□□□□□ -1
SMG6-205ENST00000570659 MYH8P13535 1937 aa8.82□□□□□ -1
SMG6-205ENST00000570659 GREB1LQ9C091 1923 aaPredicted RBP8.82□□□□□ -1
SMG6-205ENST00000570659 APBB1O00213 710 aa8.82□□□□□ -1
SMG6-205ENST00000570659 PRKAB2O43741 272 aa8.82□□□□□ -1
SMG6-205ENST00000570659 BAG3O95817 575 aa8.82□□□□□ -1
SMG6-205ENST00000570659 FGBP02675 491 aa8.82□□□□□ -1
SMG6-205ENST00000570659 HLA-DOAP06340 250 aa8.82□□□□□ -1
SMG6-205ENST00000570659 C6orf222P0C671 652 aaPredicted RBP8.82□□□□□ -1
SMG6-205ENST00000570659 IL9P15248 144 aa8.82□□□□□ -1
SMG6-205ENST00000570659 POU3F3P20264 500 aaPredicted RBP8.82□□□□□ -1
SMG6-205ENST00000570659 CST5P28325 142 aaPredicted RBP8.82□□□□□ -1
SMG6-205ENST00000570659 CCDC144BQ3MJ40 725 aa8.82□□□□□ -1
SMG6-205ENST00000570659 TNNI3KQ59H18 835 aa8.82□□□□□ -1
SMG6-205ENST00000570659 GORABQ5T7V8 394 aa8.82□□□□□ -1
SMG6-205ENST00000570659 IL27Q8NEV9 243 aa8.82□□□□□ -1
SMG6-205ENST00000570659 SDR42E1Q8WUS8 393 aa8.82□□□□□ -1
SMG6-205ENST00000570659 ARNTL2Q8WYA1 636 aa8.82□□□□□ -1
SMG6-205ENST00000570659 AKAP2Q9Y2D5 859 aa8.82□□□□□ -1
SMG6-205ENST00000570659 FPGT-TNNI3KV9GXZ4 949 aa8.82□□□□□ -1
SMG6-205ENST00000570659 ATG2AQ2TAZ0 1938 aa8.82□□□□□ -1
SMG6-205ENST00000570659 ELP1O95163 1332 aa8.81□□□□□ -1
SMG6-205ENST00000570659 VWA5AO00534 786 aa8.81□□□□□ -1
SMG6-205ENST00000570659 MPHOSPH10O00566 681 aaKnown RBP8.81□□□□□ -1
SMG6-205ENST00000570659 IDH1O75874 414 aaKnown RBP8.81□□□□□ -1
SMG6-205ENST00000570659 CYP2C9P11712 490 aa8.81□□□□□ -1
SMG6-205ENST00000570659 PLCG2P16885 1265 aa8.81□□□□□ -1
SMG6-205ENST00000570659 USP5P45974 858 aa8.81□□□□□ -1
SMG6-205ENST00000570659 GJA9P57773 515 aa8.81□□□□□ -1
SMG6-205ENST00000570659 CNTN2Q02246 1040 aa8.81□□□□□ -1
SMG6-205ENST00000570659 GPNMBQ14956 572 aa8.81□□□□□ -1
SMG6-205ENST00000570659 TMEM199Q8N511 208 aa8.81□□□□□ -1
SMG6-205ENST00000570659 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.81□□□□□ -1
SMG6-205ENST00000570659 GDPD5Q8WTR4 605 aa8.81□□□□□ -1
SMG6-205ENST00000570659 EAF2Q96CJ1 260 aaPredicted RBP8.81□□□□□ -1
SMG6-205ENST00000570659 PURBQ96QR8 312 aaKnown RBP8.81□□□□□ -1
SMG6-205ENST00000570659 CCDC8Q9H0W5 538 aaPredicted RBP8.81□□□□□ -1
SMG6-205ENST00000570659 HIPK3Q9H422 1215 aa8.81□□□□□ -1
SMG6-205ENST00000570659 VCPKMTQ9H867 229 aa8.81□□□□□ -1
SMG6-205ENST00000570659 PDGFCQ9NRA1 345 aa8.81□□□□□ -1
SMG6-205ENST00000570659 SMC4Q9NTJ3 1288 aa8.81□□□□□ -1
SMG6-205ENST00000570659 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
SMG6-205ENST00000570659 HOXC10Q9NYD6 342 aa8.81□□□□□ -1
SMG6-205ENST00000570659 NRBP1Q9UHY1 535 aa8.81□□□□□ -1
SMG6-205ENST00000570659 PCDHA11Q9Y5I1 949 aa8.81□□□□□ -1
SMG6-205ENST00000570659 A0A0U1RQG5 324 aaPredicted RBP8.8□□□□□ -1
SMG6-205ENST00000570659 MOXD2PA6NHM9 499 aa8.8□□□□□ -1
SMG6-205ENST00000570659 DUSP11O75319 330 aaKnown RBP8.8□□□□□ -1
SMG6-205ENST00000570659 UQCRFS1P1P0C7P4 283 aa8.8□□□□□ -1
SMG6-205ENST00000570659 ATP2A2P16615 1042 aaKnown RBP8.8□□□□□ -1
SMG6-205ENST00000570659 SLFN5Q08AF3 891 aa8.8□□□□□ -1
SMG6-205ENST00000570659 ACVR2BQ13705 512 aa8.8□□□□□ -1
SMG6-205ENST00000570659 TTC39AQ5SRH9 613 aa8.8□□□□□ -1
SMG6-205ENST00000570659 FAM83BQ5T0W9 1011 aa8.8□□□□□ -1
SMG6-205ENST00000570659 MAMDC4Q6UXC1 1216 aa8.8□□□□□ -1
SMG6-205ENST00000570659 DEFB128Q7Z7B8 93 aa8.8□□□□□ -1
SMG6-205ENST00000570659 FAM9BQ8IZU0 186 aa8.8□□□□□ -1
SMG6-205ENST00000570659 LCORLQ8N3X6 602 aa8.8□□□□□ -1
SMG6-205ENST00000570659 NUP133Q8WUM0 1156 aa8.8□□□□□ -1
SMG6-205ENST00000570659 NOL10Q9BSC4 688 aaKnown RBP8.8□□□□□ -1
SMG6-205ENST00000570659 ALG13Q9NP73 1137 aaKnown RBP8.8□□□□□ -1
SMG6-205ENST00000570659 TRMT13Q9NUP7 481 aaKnown RBP8.8□□□□□ -1
SMG6-205ENST00000570659 TMX2Q9Y320 296 aa8.8□□□□□ -1
SMG6-205ENST00000570659 SLC4A7Q9Y6M7 1214 aa8.8□□□□□ -1
SMG6-205ENST00000570659 TANC1Q9C0D5 1861 aa8.8□□□□□ -1
SMG6-205ENST00000570659 ZBBXA8MT70 800 aa8.79□□□□□ -1
SMG6-205ENST00000570659 EEF2P13639 858 aaKnown RBP8.79□□□□□ -1
SMG6-205ENST00000570659 STAT3P40763 770 aa8.79□□□□□ -1
SMG6-205ENST00000570659 POLA2Q14181 598 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms