RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 NAPBQ9H115 298 aa16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 IL17RBQ9NRM6 502 aa16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 LRRC37A2A6NM11 1700 aa16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 RTP1P59025 263 aa16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 MDM2Q00987 491 aaPredicted RBP16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 TFAP4Q01664 338 aa16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 LRRC41Q15345 812 aa16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 ZNF444Q8N0Y2 327 aaPredicted RBP16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 TINF2Q9BSI4 451 aa16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 TEX13BQ9BXU2 312 aa16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 SLC38A10Q9HBR0 1119 aa16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 RAVER2Q9HCJ3 691 aaKnown RBP16.49■□□□□ 0.23
GTF3C1-211ENST00000569653 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 SNAI1O95863 264 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 TTLL1O95922 423 aa16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 KCTD2Q14681 263 aa16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 CPXCR1Q8N123 301 aa16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 PRPF38AQ8NAV1 312 aaKnown RBP16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 NACAP1Q9BZK3 213 aa16.48■□□□□ 0.23
GTF3C1-211ENST00000569653 ADCY6O43306 1168 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 TSPY3P0CV98 308 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 TSPY8P0CW00 308 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 IRX5P78411 483 aaPredicted RBP16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 SNX17Q15036 470 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 ZNF589Q86UQ0 364 aaPredicted RBP16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 FERMT2Q96AC1 680 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 SLC5A4Q9NY91 659 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 DIS3Q9Y2L1 958 aaKnown RBP16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 LAMA4Q16363 1823 aa16.47■□□□□ 0.23
GTF3C1-211ENST00000569653 ZNF536O15090 1300 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 A0A0C4DFX4 3053 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 PGK1P00558 417 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 IGHDP01880 384 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 NOVP48745 357 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 PDE4BQ07343 736 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 LRRFIP1Q32MZ4 808 aaKnown RBP16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 TRIM60Q495X7 471 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 SLC39A5Q6ZMH5 540 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 SH3RF1Q7Z6J0 888 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 TDHQ8IZJ6 230 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 UBE2OQ9C0C9 1292 aaKnown RBP16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 ANAPC4Q9UJX5 808 aa16.46■□□□□ 0.23
GTF3C1-211ENST00000569653 ADAMTS4O75173 837 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 FGRP09769 529 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 BMP3P12645 472 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 COPB2P35606 906 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 SNAP25P60880 206 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 NMIQ13287 307 aaPredicted RBP16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 LRIT3Q3SXY7 679 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 Q7L0L9 218 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 ARRDC4Q8NCT1 418 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 NRBP1Q9UHY1 535 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 ATP11BQ9Y2G3 1177 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 DDX49Q9Y6V7 483 aaKnown RBP16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 ASTN1O14525 1302 aa16.45■□□□□ 0.22
GTF3C1-211ENST00000569653 MYADML2A6NDP7 307 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 KBTBD13C9JR72 458 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 MCCP23508 829 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 ALX1Q15699 326 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 MAMDC4Q6UXC1 1216 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 GMCL1Q96IK5 515 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 KATNBL1Q9H079 304 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 ZNF287Q9HBT7 754 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 XPNPEP3Q9NQH7 507 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 PHF24Q9UPV7 400 aa16.44■□□□□ 0.22
GTF3C1-211ENST00000569653 ORC4O43929 436 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 ZBED4O75132 1171 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 FGAP02671 866 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 ITGB8P26012 769 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 EXOC6Q8TAG9 804 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 PDLIM7Q9NR12 457 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 SYNRGQ9UMZ2 1314 aa16.43■□□□□ 0.22
GTF3C1-211ENST00000569653 EYSQ5T1H1 3165 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 TRIM43BA6NCK2 446 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 HSPD1P10809 573 aaKnown RBP16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 RARBP10826 455 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 AKR1A1P14550 325 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 PTGS1P23219 599 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 OAZ1P54368 228 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 CCSAPQ6IQ19 270 aaPredicted RBP16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms