RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.2
HERPUD1-218ENST00000569569 SMCHD1A6NHR9 2005 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 PLA2G6O60733 806 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 ZBED4O75132 1171 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 HMGCRP04035 888 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 INHAP05111 366 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 CYP21A2P08686 494 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 FDX1P10109 184 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 STAT2P52630 851 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 MLLT1Q03111 559 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 GRB14Q14449 540 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 NCAPG2Q86XI2 1143 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 RIOX2Q8IUF8 465 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 ZKSCAN3Q9BRR0 538 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 ZNF236Q9UL36 1845 aa16.26■□□□□ 0.19
HERPUD1-218ENST00000569569 BRCA2P51587 3418 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 CCL5P13501 91 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 COPB2P35606 906 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 TRDNQ13061 729 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 TRIB2Q92519 343 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 APBA2Q99767 749 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 RNF208Q9H0X6 261 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
HERPUD1-218ENST00000569569 MYH6P13533 1939 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 ATP2A1O14983 1001 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 HOXC6P09630 235 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 IKQ13123 557 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 DPP9Q86TI2 863 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 ABRAQ8N0Z2 381 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 ZSCAN10Q96SZ4 725 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 TEX13BQ9BXU2 312 aa16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 LSG1Q9H089 658 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 RBM8AQ9Y5S9 174 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-218ENST00000569569 CDC45O75419 566 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 GJB1P08034 283 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 FCER1AP12319 257 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 ZKSCAN1P17029 563 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 EN2P19622 333 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 ADORA2AP29274 412 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 OAZ1P54368 228 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 CCDC96Q2M329 555 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 CPXCR1Q8N123 301 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 UNC93B1Q9H1C4 597 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 SLC5A4Q9NY91 659 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 PDE4DIPQ5VU43 2346 aa16.23■□□□□ 0.19
HERPUD1-218ENST00000569569 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 E7EWF7 191 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 PDHBP11177 359 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 CCL14Q16627 93 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 BTNL9Q6UXG8 535 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 RASGRP2Q7LDG7 609 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 NCOA7Q8NI08 942 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 NPLOC4Q8TAT6 608 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 HMX1Q9NP08 348 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 PRR12Q9ULL5 1215 aa16.22■□□□□ 0.19
HERPUD1-218ENST00000569569 TNKSO95271 1327 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 SNHG28P0DPA3 235 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 GJA8P48165 433 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 SLC4A3P48751 1232 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 TRIM32Q13049 653 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 KCTD2Q14681 263 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 ENAHQ8N8S7 591 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 PNMA1Q8ND90 353 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 MMP19Q99542 508 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 PAK6Q9NQU5 681 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
HERPUD1-218ENST00000569569 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 COBLO75128 1261 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 SGPL1O95470 568 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 CAPN2P17655 700 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 NECTIN1Q15223 517 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 CYB5R4Q7L1T6 521 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 CHST13Q8NET6 341 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.188e-7■■■■□ 22.8
HERPUD1-218ENST00000569569 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 TAF6LQ9Y6J9 622 aa16.2■□□□□ 0.18
HERPUD1-218ENST00000569569 PRKAR2AP13861 404 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 SLC16A2P36021 539 aa16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 CACNB2Q08289 660 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms