RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 TRIM32Q13049 653 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 GRB14Q14449 540 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 TMEM132BQ14DG7 1078 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 SLFN13Q68D06 897 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 DPP9Q86TI2 863 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 STAG1Q8WVM7 1258 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 SLF1Q9BQI6 1058 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
UBR1-210ENST00000569337 RNF41Q9H4P4 317 aaPredicted RBP11.04□□□□□ -0.64
UBR1-210ENST00000569337 PAK6Q9NQU5 681 aaPredicted RBP11.04□□□□□ -0.64
UBR1-210ENST00000569337 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 ISY1Q9ULR0 285 aaKnown RBP11.04□□□□□ -0.64
UBR1-210ENST00000569337 ADAMTS5Q9UNA0 930 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 B4E1Z4 1266 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 NMT2O60551 498 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 ZBED4O75132 1171 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 PCP11498 1178 aaKnown RBP11.03□□□□□ -0.64
UBR1-210ENST00000569337 FCER1AP12319 257 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 BMP3P12645 472 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
UBR1-210ENST00000569337 ADORA2AP29274 412 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 STAT3P40763 770 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 SLC1A4P43007 532 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 IKQ13123 557 aaPredicted RBP11.03□□□□□ -0.64
UBR1-210ENST00000569337 CCL14Q16627 93 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 RIOX2Q8IUF8 465 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 KIFC2Q96AC6 838 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 SHISA4Q96DD7 197 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 IL17RBQ9NRM6 502 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 SLC5A4Q9NY91 659 aa11.03□□□□□ -0.64
UBR1-210ENST00000569337 MYH4Q9Y623 1939 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 TMEM232C9JQI7 657 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 HOXC6P09630 235 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 MCCP23508 829 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 COPB2P35606 906 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 ANTXR2P58335 489 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 ANAPC15P60006 121 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 CACNB2Q08289 660 aaPredicted RBP11.02□□□□□ -0.65
UBR1-210ENST00000569337 MAP3K21Q5TCX8 1036 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 CYB5R4Q7L1T6 521 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 CHST3Q7LGC8 479 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 MB21D2Q8IYB1 491 aaPredicted RBP11.02□□□□□ -0.65
UBR1-210ENST00000569337 ABRAQ8N0Z2 381 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 NPLOC4Q8TAT6 608 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 CHURC1Q8WUH1 139 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 CHMP4CQ96CF2 233 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 GMCL1Q96IK5 515 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.65
UBR1-210ENST00000569337 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
UBR1-210ENST00000569337 ZNF214Q9UL59 606 aaPredicted RBP11.02□□□□□ -0.65
UBR1-210ENST00000569337 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
UBR1-210ENST00000569337 KDM4AO75164 1064 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 FDX1P10109 184 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 STAT2P52630 851 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 KCTD2Q14681 263 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
UBR1-210ENST00000569337 RCSD1Q6JBY9 416 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 FAM160B2Q86V87 743 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 REPS2Q8NFH8 660 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 NCOA7Q8NI08 942 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 ESR2Q92731 530 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 TCEANC2Q96MN5 208 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 MMP19Q99542 508 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 TEX13BQ9BXU2 312 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
UBR1-210ENST00000569337 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 UPF2Q9HAU5 1272 aaKnown RBP11.01□□□□□ -0.65
UBR1-210ENST00000569337 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 FLRT1Q9NZU1 646 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 ZSWIM5Q9P217 1185 aa11.01□□□□□ -0.65
UBR1-210ENST00000569337 BRCA2P51587 3418 aa11□□□□□ -0.65
UBR1-210ENST00000569337 MGAMO43451 1857 aa11□□□□□ -0.65
UBR1-210ENST00000569337 ATP2A1O14983 1001 aa11□□□□□ -0.65
UBR1-210ENST00000569337 COBLO75128 1261 aa11□□□□□ -0.65
UBR1-210ENST00000569337 FARP2O94887 1054 aaPredicted RBP11□□□□□ -0.65
UBR1-210ENST00000569337 TOP1P11387 765 aaKnown RBP11□□□□□ -0.65
UBR1-210ENST00000569337 CASTP20810 708 aaKnown RBP11□□□□□ -0.65
UBR1-210ENST00000569337 CNGA1P29973 690 aa11□□□□□ -0.65
UBR1-210ENST00000569337 CYP2C19P33261 490 aa11□□□□□ -0.65
UBR1-210ENST00000569337 NOVP48745 357 aa11□□□□□ -0.65
UBR1-210ENST00000569337 NT5C2P49902 561 aa11□□□□□ -0.65
UBR1-210ENST00000569337 EXOSC10Q01780 885 aaKnown RBP11□□□□□ -0.65
UBR1-210ENST00000569337 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
UBR1-210ENST00000569337 KCTD1Q719H9 257 aa11□□□□□ -0.65
UBR1-210ENST00000569337 TTC14Q96N46 770 aa11□□□□□ -0.65
UBR1-210ENST00000569337 ZKSCAN3Q9BRR0 538 aa11□□□□□ -0.65
UBR1-210ENST00000569337 HTATIP2Q9BUP3 242 aa11□□□□□ -0.65
UBR1-210ENST00000569337 LRRC2Q9BYS8 371 aa11□□□□□ -0.65
UBR1-210ENST00000569337 TM6SF1Q9BZW5 370 aa11□□□□□ -0.65
UBR1-210ENST00000569337 KRT23Q9C075 422 aa11□□□□□ -0.65
UBR1-210ENST00000569337 SLC38A10Q9HBR0 1119 aa11□□□□□ -0.65
UBR1-210ENST00000569337 SENP2Q9HC62 589 aa11□□□□□ -0.65
UBR1-210ENST00000569337 RAVER2Q9HCJ3 691 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms