RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 DHTKD1Q96HY7 919 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 ATP6V1G3Q96LB4 118 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 CC2D2AQ9P2K1 1620 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 ZNF189O75820 626 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 TMED10P49755 219 aaKnown RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 USP14P54578 494 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 TTC6Q86TZ1 520 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 CTNND2Q9UQB3 1225 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 UBE4BO95155 1302 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 UBN2Q6ZU65 1347 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 H2AFZP0C0S5 128 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 RIPPLY1Q0D2K3 151 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 KRT80Q6KB66 452 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 H2AFVQ71UI9 128 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 TRIML2Q8N7C3 387 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 MEIS3Q99687 375 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 MKNK2Q9HBH9 465 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 CABP1Q9NZU7 370 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 PPIP5K1Q6PFW1 1433 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SEC31AO94979 1220 aaKnown RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 SESTD1Q86VW0 696 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 HIC2Q96JB3 615 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 ANGPTL3Q9Y5C1 460 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 RPS6KA5O75582 802 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 PPP2R2AP63151 447 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 HAUS3Q68CZ6 603 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 SMIM23A6NLE4 172 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 KCNJ18B7U540 433 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 LAD1O00515 517 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 GSTO1P78417 241 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 KCNJ12Q14500 433 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 PRAM1Q96QH2 718 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 OSBPL1AQ9BXW6 950 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 ANGEL1Q9UNK9 670 aaKnown RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 LIN7AO14910 233 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 GHRP10912 638 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 MCM7P33993 719 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 ATG16L1Q676U5 607 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 HNRNPH1P31943 449 aaKnown RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 PLCB3Q01970 1234 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 GUCY2DQ02846 1103 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 KRT39Q6A163 491 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 KLHL7Q8IXQ5 586 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC8Q9H0W5 538 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 XAB2Q9HCS7 855 aaKnown RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 FRMD4BQ9Y2L6 1034 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 AHCYL1O43865 530 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 APOA1P02647 267 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 PFKFB1P16118 471 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 EEF1DP29692 281 aaKnown RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 AP1B1Q10567 949 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 YTHDF3Q7Z739 585 aaKnown RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 IWS1Q96ST2 819 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 VPS16Q9H269 839 aa7.78□□□□□ -1.16
CNOT1-216ENST00000569240 A1CFQ9NQ94 594 aaKnown RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 SCHIP1Q9P0W5 487 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-216ENST00000569240 STRNO43815 780 aa7.77□□□□□ -1.16
CNOT1-216ENST00000569240 BAG2O95816 211 aa7.77□□□□□ -1.16
CNOT1-216ENST00000569240 TRIM60Q495X7 471 aa7.77□□□□□ -1.16
CNOT1-216ENST00000569240 KLC3Q6P597 504 aa7.77□□□□□ -1.16
CNOT1-216ENST00000569240 NELFBQ8WX92 580 aa7.77□□□□□ -1.16
CNOT1-216ENST00000569240 RGL1Q9NZL6 768 aa7.77□□□□□ -1.16
CNOT1-216ENST00000569240 ATXN2Q99700 1313 aaKnown RBP7.77□□□□□ -1.16
CNOT1-216ENST00000569240 MAGEA13PA6NCF6 341 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 SLC39A14Q15043 492 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 KSR2Q6VAB6 950 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 SLITRK6Q9H5Y7 841 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 RAD21O60216 631 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 BAG3O95817 575 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 PSMD2Q13200 908 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 GNPTABQ3T906 1256 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 KRT25Q7Z3Z0 450 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 SCYL3Q8IZE3 742 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 TRIM63Q969Q1 353 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 RILPQ96NA2 401 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 CATSPER2Q96P56 530 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 CARD10Q9BWT7 1032 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 CRNKL1Q9BZJ0 848 aaKnown RBP7.77□□□□□ -1.17
CNOT1-216ENST00000569240 FOXP3Q9BZS1 431 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 NT5C3AQ9H0P0 336 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 ARHGAP26Q9UNA1 814 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 SERPINI2O75830 405 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 MMEP08473 750 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 H2AFXP16104 143 aaPredicted RBP7.77□□□□□ -1.17
CNOT1-216ENST00000569240 STX17P56962 302 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 BYSLQ13895 437 aaKnown RBP7.77□□□□□ -1.17
CNOT1-216ENST00000569240 MORC4Q8TE76 937 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 TTC25Q96NG3 672 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 SH2D4AQ9H788 454 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 FAM107AO95990 144 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 KPNA2P52292 529 aaKnown RBP7.77□□□□□ -1.17
CNOT1-216ENST00000569240 COPB1P53618 953 aaKnown RBP7.77□□□□□ -1.17
CNOT1-216ENST00000569240 RAB15P59190 212 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 DIABLOQ9NR28 239 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 TPCN1Q9ULQ1 816 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 FAM187AA6NFU0 413 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 PDE4DQ08499 809 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms