RNA–Protein interactions for RNA: ENST00000569005.5

EIF3C-213, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 5

Gene EIF3C, Length 610 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-213ENST00000569005 PRDM1O75626 825 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 ZNF865P0CJ78 1059 aaPredicted RBP12.73□□□□□ -0.37
EIF3C-213ENST00000569005 GNAT2P19087 354 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 ITGB8P26012 769 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 KCTD2Q14681 263 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 C1orf53Q5VUE5 145 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
EIF3C-213ENST00000569005 IFNL3Q8IZI9 196 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 TRIM43Q96BQ3 446 aaPredicted RBP12.73□□□□□ -0.37
EIF3C-213ENST00000569005 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 TINF2Q9BSI4 451 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
EIF3C-213ENST00000569005 PRDM5Q9NQX1 630 aaPredicted RBP12.73□□□□□ -0.37
EIF3C-213ENST00000569005 DNAJC25-GNG10A0A024R161 153 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
EIF3C-213ENST00000569005 KBTBD13C9JR72 458 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 COPB2P35606 906 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 TDO2P48775 406 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
EIF3C-213ENST00000569005 CEP95Q96GE4 821 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 FGD4Q96M96 766 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 TEX13BQ9BXU2 312 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 MTMR4Q9NYA4 1195 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 SYNPO2Q9UMS6 1093 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 PHF24Q9UPV7 400 aa12.72□□□□□ -0.37
EIF3C-213ENST00000569005 RAD21O60216 631 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 ADAMTS4O75173 837 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 EPHB4P54760 987 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 FAM109BQ6ICB4 259 aaPredicted RBP12.71□□□□□ -0.37
EIF3C-213ENST00000569005 SNRNP48Q6IEG0 339 aaKnown RBP12.71□□□□□ -0.37
EIF3C-213ENST00000569005 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.37
EIF3C-213ENST00000569005 GMCL1P1Q8NEA9 526 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 NEDD1Q8NHV4 660 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
EIF3C-213ENST00000569005 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 PDLIM7Q9NR12 457 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 PRKAG2Q9UGJ0 569 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
EIF3C-213ENST00000569005 MCM3APO60318 1980 aa12.7□□□□□ -0.38
EIF3C-213ENST00000569005 SNAI1O95863 264 aaPredicted RBP12.7□□□□□ -0.38
EIF3C-213ENST00000569005 PGK1P00558 417 aa12.7□□□□□ -0.38
EIF3C-213ENST00000569005 TLE2Q04725 743 aa12.7□□□□□ -0.38
EIF3C-213ENST00000569005 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
EIF3C-213ENST00000569005 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
EIF3C-213ENST00000569005 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
EIF3C-213ENST00000569005 TTYH1Q9H313 450 aaPredicted RBP12.7□□□□□ -0.38
EIF3C-213ENST00000569005 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
EIF3C-213ENST00000569005 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
EIF3C-213ENST00000569005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
EIF3C-213ENST00000569005 ERC2O15083 957 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 ADCY6O43306 1168 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 TTLL1O95922 423 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 APPP05067 770 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 RARBP10826 455 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 MX1P20591 662 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
EIF3C-213ENST00000569005 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
EIF3C-213ENST00000569005 ZNF467Q7Z7K2 595 aaPredicted RBP12.69□□□□□ -0.38
EIF3C-213ENST00000569005 ZNF444Q8N0Y2 327 aaPredicted RBP12.69□□□□□ -0.38
EIF3C-213ENST00000569005 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
EIF3C-213ENST00000569005 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 RAVER2Q9HCJ3 691 aaKnown RBP12.69□□□□□ -0.38
EIF3C-213ENST00000569005 FEM1BQ9UK73 627 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 CHD7Q9P2D1 2997 aa12.69□□□□□ -0.38
EIF3C-213ENST00000569005 ZNF536O15090 1300 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 AKR1A1P14550 325 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 OAZ1P54368 228 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 RRP1P56182 461 aaKnown RBP12.68□□□□□ -0.38
EIF3C-213ENST00000569005 PPARAQ07869 468 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 ZNF697Q5TEC3 545 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 MYLIPQ8WY64 445 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 KATNBL1Q9H079 304 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 TTC28Q96AY4 2481 aa12.68□□□□□ -0.38
EIF3C-213ENST00000569005 MUC3AQ02505 3323 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 SYNRGQ9UMZ2 1314 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 A0A1W2PQ45 241 aaPredicted RBP12.67□□□□□ -0.38
EIF3C-213ENST00000569005 A0A1W2PQY0 241 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 MYADML2A6NDP7 307 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 ZBED4O75132 1171 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 BMP3P12645 472 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 NOVP48745 357 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 TFAP4Q01664 338 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
EIF3C-213ENST00000569005 VPS53Q5VIR6 699 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 RASGRP2Q7LDG7 609 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 RNF180Q86T96 592 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 NAPBQ9H115 298 aa12.67□□□□□ -0.38
EIF3C-213ENST00000569005 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms