RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SH3RF1Q7Z6J0 888 aa20.64■□□□□ 0.89
SMPD3-211ENST00000568373 HOMER1Q86YM7 354 aa20.64■□□□□ 0.89
SMPD3-211ENST00000568373 LRRC47Q8N1G4 583 aaKnown RBP20.64■□□□□ 0.89
SMPD3-211ENST00000568373 RIOX1Q9H6W3 641 aa20.64■□□□□ 0.89
SMPD3-211ENST00000568373 SNHG28P0DPA3 235 aa20.63■□□□□ 0.89
SMPD3-211ENST00000568373 LMOD1P29536 600 aaPredicted RBP20.63■□□□□ 0.89
SMPD3-211ENST00000568373 IL17AQ16552 155 aa20.63■□□□□ 0.89
SMPD3-211ENST00000568373 ASPRV1Q53RT3 343 aa20.63■□□□□ 0.89
SMPD3-211ENST00000568373 MLKLQ8NB16 471 aa20.63■□□□□ 0.89
SMPD3-211ENST00000568373 GREB1LQ9C091 1923 aaPredicted RBP20.63■□□□□ 0.89
SMPD3-211ENST00000568373 SMC2O95347 1197 aa20.63■□□□□ 0.89
SMPD3-211ENST00000568373 CACTINQ8WUQ7 758 aaKnown RBP20.63■□□□□ 0.89
SMPD3-211ENST00000568373 PIGSQ96S52 555 aa20.63■□□□□ 0.89
SMPD3-211ENST00000568373 XPO4Q9C0E2 1151 aaKnown RBP20.63■□□□□ 0.89
SMPD3-211ENST00000568373 IFNKQ9P0W0 207 aa20.63■□□□□ 0.89
SMPD3-211ENST00000568373 EIF6P56537 245 aaKnown RBP20.62■□□□□ 0.89
SMPD3-211ENST00000568373 AOC3Q16853 763 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 CLEC10AQ8IUN9 316 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 PAGE5Q96GU1 130 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 PYM1Q9BRP8 204 aaKnown RBP20.62■□□□□ 0.89
SMPD3-211ENST00000568373 UBA5Q9GZZ9 404 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 VAT1LQ9HCJ6 419 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 DACH1Q9UI36 760 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 PCDHAC2Q9Y5I4 1007 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 FRMPD2Q68DX3 1309 aaPredicted RBP20.62■□□□□ 0.89
SMPD3-211ENST00000568373 GNA11P29992 359 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 LONP1P36776 959 aaKnown RBP20.62■□□□□ 0.89
SMPD3-211ENST00000568373 INF2Q27J81 1249 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 ZFPM1Q8IX07 1006 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 IDI2Q9BXS1 227 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 DHX36Q9H2U1 1008 aaKnown RBP20.62■□□□□ 0.89
SMPD3-211ENST00000568373 C6orf50Q9HD87 102 aa20.62■□□□□ 0.89
SMPD3-211ENST00000568373 SMCO2A6NFE2 343 aa20.61■□□□□ 0.89
SMPD3-211ENST00000568373 MYO1BO43795 1136 aa20.61■□□□□ 0.89
SMPD3-211ENST00000568373 RBM5P52756 815 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMPD3-211ENST00000568373 FANCCQ00597 558 aa20.61■□□□□ 0.89
SMPD3-211ENST00000568373 LRRC8AQ8IWT6 810 aa20.61■□□□□ 0.89
SMPD3-211ENST00000568373 SERPINA10Q9UK55 444 aa20.61■□□□□ 0.89
SMPD3-211ENST00000568373 hCG_1984214I3L0E3 225 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 NEMFO60524 1076 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 ATP1A3P13637 1013 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 AFMP43652 599 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 E2F4Q16254 413 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 SOGA3Q5TF21 947 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 KRT25Q7Z3Z0 450 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 FILIP1Q7Z7B0 1213 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 ZNF713Q8N859 430 aaPredicted RBP20.6■□□□□ 0.89
SMPD3-211ENST00000568373 IQUBQ8NA54 791 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 CCDC17Q96LX7 622 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 SIPA1L1O43166 1804 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 ESYT2A0FGR8 921 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 CACNB3P54284 484 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 SUPT20HQ8NEM7 779 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 IMPACTQ9P2X3 320 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 FAM198AQ9UFP1 575 aa20.6■□□□□ 0.89
SMPD3-211ENST00000568373 R3HCC1Q9Y3T6 440 aaKnown RBP20.6■□□□□ 0.89
SMPD3-211ENST00000568373 MPHOSPH10O00566 681 aaKnown RBP20.59■□□□□ 0.89
SMPD3-211ENST00000568373 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
SMPD3-211ENST00000568373 TERF1P54274 439 aa20.59■□□□□ 0.89
SMPD3-211ENST00000568373 TCP10Q12799 353 aa20.59■□□□□ 0.89
SMPD3-211ENST00000568373 PPP4R3BQ5MIZ7 849 aa20.59■□□□□ 0.89
SMPD3-211ENST00000568373 DNAJC18Q9H819 358 aa20.59■□□□□ 0.89
SMPD3-211ENST00000568373 MYH4Q9Y623 1939 aa20.59■□□□□ 0.89
SMPD3-211ENST00000568373 LAD1O00515 517 aa20.58■□□□□ 0.89
SMPD3-211ENST00000568373 GSDMDP57764 484 aa20.58■□□□□ 0.89
SMPD3-211ENST00000568373 ZNF543Q08ER8 600 aa20.58■□□□□ 0.89
SMPD3-211ENST00000568373 DPYDQ12882 1025 aa20.58■□□□□ 0.89
SMPD3-211ENST00000568373 FANCLQ9NW38 375 aa20.58■□□□□ 0.89
SMPD3-211ENST00000568373 PI4KBQ9UBF8 816 aa20.58■□□□□ 0.89
SMPD3-211ENST00000568373 TXLNAP40222 546 aa20.58■□□□□ 0.88
SMPD3-211ENST00000568373 ARID5BQ14865 1188 aa20.58■□□□□ 0.88
SMPD3-211ENST00000568373 NONOQ15233 471 aaKnown RBP eCLIP20.58■□□□□ 0.88
SMPD3-211ENST00000568373 DNTTIP2Q5QJE6 756 aaKnown RBP20.58■□□□□ 0.88
SMPD3-211ENST00000568373 DTHD1Q6ZMT9 781 aa20.58■□□□□ 0.88
SMPD3-211ENST00000568373 GSDMAQ96QA5 445 aa20.58■□□□□ 0.88
SMPD3-211ENST00000568373 TMEM60Q9H2L4 133 aa20.58■□□□□ 0.88
SMPD3-211ENST00000568373 DDTLA6NHG4 134 aaPredicted RBP20.57■□□□□ 0.88
SMPD3-211ENST00000568373 FMR1Q06787 632 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD3-211ENST00000568373 PDXDC2PQ6P474 469 aa20.57■□□□□ 0.88
SMPD3-211ENST00000568373 ENOX1Q8TC92 643 aaKnown RBP20.57■□□□□ 0.88
SMPD3-211ENST00000568373 GPCPD1Q9NPB8 672 aa20.57■□□□□ 0.88
SMPD3-211ENST00000568373 PPIP5K2O43314 1243 aa20.57■□□□□ 0.88
SMPD3-211ENST00000568373 C21orf2O43822 256 aa20.57■□□□□ 0.88
SMPD3-211ENST00000568373 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
SMPD3-211ENST00000568373 PRPHP41219 470 aa20.57■□□□□ 0.88
SMPD3-211ENST00000568373 CT47A1Q5JQC4 288 aaPredicted RBP20.57■□□□□ 0.88
SMPD3-211ENST00000568373 REXO1Q8N1G1 1221 aaKnown RBP20.57■□□□□ 0.88
SMPD3-211ENST00000568373 CBFA2T2O43439 604 aa20.56■□□□□ 0.88
SMPD3-211ENST00000568373 SERPINC1P01008 464 aa20.56■□□□□ 0.88
SMPD3-211ENST00000568373 ERCC5P28715 1186 aaPredicted RBP20.56■□□□□ 0.88
SMPD3-211ENST00000568373 CASP1P29466 404 aa20.56■□□□□ 0.88
SMPD3-211ENST00000568373 GPATCH4Q5T3I0 446 aaKnown RBP20.56■□□□□ 0.88
SMPD3-211ENST00000568373 SH3BP5LQ7L8J4 393 aa20.56■□□□□ 0.88
SMPD3-211ENST00000568373 YDJCA8MPS7 323 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 UBASH3AP57075 661 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 ATP2B2Q01814 1243 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 TMC6Q7Z403 805 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 NEK8Q86SG6 692 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 ZSCAN29Q8IWY8 852 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms