RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG1-214ENST00000568038 ZNF512BQ96KM6 892 aaPredicted RBP9.38□□□□□ -0.91
SMG1-214ENST00000568038 CEP63Q96MT8 703 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 HAUS7Q99871 368 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 ANTXR1Q9H6X2 564 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 RNF181Q9P0P0 153 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 ZNRF3Q9ULT6 936 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 COL4A5P29400 1685 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 GOLIM4O00461 696 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 RAD17O75943 681 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 C9orf131Q5VYM1 1079 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 TTLL5Q6EMB2 1281 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 ZNF280CQ8ND82 737 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 RILPL2Q969X0 211 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 AVENQ9NQS1 362 aaPredicted RBP9.37□□□□□ -0.91
SMG1-214ENST00000568038 PAG1Q9NWQ8 432 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 ABCF2Q9UG63 623 aa9.37□□□□□ -0.91
SMG1-214ENST00000568038 CCDC88AQ3V6T2 1871 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 COL1A1P02452 1464 aaPredicted RBP9.36□□□□□ -0.91
SMG1-214ENST00000568038 KRBA1A5PL33 1030 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 GNB5O14775 395 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 ITGB2P05107 769 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 CYP2E1P05181 493 aaPredicted RBP9.36□□□□□ -0.91
SMG1-214ENST00000568038 GSPT1P15170 499 aaKnown RBP9.36□□□□□ -0.91
SMG1-214ENST00000568038 CRTC2Q53ET0 693 aaPredicted RBP9.36□□□□□ -0.91
SMG1-214ENST00000568038 C1orf53Q5VUE5 145 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 WDR66Q8TBY9 1149 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 SPOCK3Q9BQ16 436 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 MXD3Q9BW11 206 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 PIH1D3Q9NQM4 214 aaKnown RBP9.36□□□□□ -0.91
SMG1-214ENST00000568038 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
SMG1-214ENST00000568038 CHD4Q14839 1912 aa9.36□□□□□ -0.91
SMG1-214ENST00000568038 FAM205AQ6ZU69 1335 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 FZD9O00144 591 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 PIK3R2O00459 728 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 PSMD14O00487 310 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 IDH1O75874 414 aaKnown RBP9.35□□□□□ -0.91
SMG1-214ENST00000568038 SBF1O95248 1867 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 SDSP20132 328 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 EIF6P56537 245 aaKnown RBP9.35□□□□□ -0.91
SMG1-214ENST00000568038 CXCL9Q07325 125 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 DPYDQ12882 1025 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 MFSD14BQ5SR56 506 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 RAB44Q7Z6P3 723 aaPredicted RBP9.35□□□□□ -0.91
SMG1-214ENST00000568038 ALDH16A1Q8IZ83 802 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 CNTROBQ8N137 903 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 EVI5LQ96CN4 794 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 SLC30A3Q99726 388 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 RAI14Q9P0K7 980 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 LRP2BPQ9P2M1 347 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 AKAP11Q9UKA4 1901 aa9.35□□□□□ -0.91
SMG1-214ENST00000568038 PDS5AQ29RF7 1337 aaKnown RBP9.34□□□□□ -0.91
SMG1-214ENST00000568038 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 SCN9AQ15858 1988 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 F8W031 263 aaPredicted RBP9.34□□□□□ -0.91
SMG1-214ENST00000568038 VIL1P09327 827 aaKnown RBP9.34□□□□□ -0.91
SMG1-214ENST00000568038 ALAS2P22557 587 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 PRDX5P30044 214 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 DGKGP49619 791 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 TNIP1Q15025 636 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 TTF1Q15361 905 aaPredicted RBP9.34□□□□□ -0.91
SMG1-214ENST00000568038 GRIK5Q16478 980 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 DACT2Q5SW24 774 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 CERS5Q8N5B7 392 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 TBC1D22AQ8WUA7 517 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 SUSD3Q96L08 255 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 FSD1Q9BTV5 496 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 MYH13Q9UKX3 1938 aa9.34□□□□□ -0.91
SMG1-214ENST00000568038 LDHBP07195 334 aaKnown RBP9.33□□□□□ -0.92
SMG1-214ENST00000568038 HIRAP54198 1017 aaPredicted RBP9.33□□□□□ -0.92
SMG1-214ENST00000568038 SPEM2Q0P670 501 aa9.33□□□□□ -0.92
SMG1-214ENST00000568038 PTK7Q13308 1070 aa9.33□□□□□ -0.92
SMG1-214ENST00000568038 SPTY2D1Q68D10 685 aaPredicted RBP9.33□□□□□ -0.92
SMG1-214ENST00000568038 KIAA0825Q8IV33 1275 aa9.33□□□□□ -0.92
SMG1-214ENST00000568038 ZGPATQ8N5A5 531 aaKnown RBP9.33□□□□□ -0.92
SMG1-214ENST00000568038 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
SMG1-214ENST00000568038 C2orf49Q9BVC5 232 aaPredicted RBP9.33□□□□□ -0.92
SMG1-214ENST00000568038 SALL1Q9NSC2 1324 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 ELOA3CA0A087WX78 387 aaPredicted RBP9.32□□□□□ -0.92
SMG1-214ENST00000568038 ELOA3DA6NLF2 546 aaPredicted RBP9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L15C9J2P7 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L10C9JJH3 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L13C9JLJ4 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L12C9JPN9 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L11C9JVI0 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L21D6R901 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L18D6R9N7 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L22D6RA61 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L17D6RBQ6 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L19D6RCP7 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L20D6RJB6 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 CHGBP05060 677 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 MECOMQ03112 1051 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 USP17L24Q0WX57 530 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 MAP3K12Q12852 859 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms