RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
COMMD4-221ENST00000567935 BRMS1Q9HCU9 246 aa16.83■□□□□ 0.28
COMMD4-221ENST00000567935 UNC80Q8N2C7 3258 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 CNTNAP5Q8WYK1 1306 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 ENTPD3O75355 529 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 PICALMQ13492 652 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 SLC44A5Q8NCS7 719 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 WNK4Q96J92 1243 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 AIFM3Q96NN9 605 aa16.82■□□□□ 0.28
COMMD4-221ENST00000567935 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.82■□□□□ 0.28
COMMD4-221ENST00000567935 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
COMMD4-221ENST00000567935 A0A1W2PQ27 194 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 A0A1W2PQ64 194 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 A0A1W2PQD8 194 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 WNT10BO00744 389 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
COMMD4-221ENST00000567935 STK38Q15208 465 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 NOSTRINQ8IVI9 506 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 LINC00301Q8NCQ3 95 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 SH3TC2Q8TF17 1288 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 SLC10A4Q96EP9 437 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 TMEM47Q9BQJ4 181 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 SH3GLB2Q9NR46 395 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 TMOD2Q9NZR1 351 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 PI4KBQ9UBF8 816 aa16.81■□□□□ 0.28
COMMD4-221ENST00000567935 MORC2Q9Y6X9 1032 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-221ENST00000567935 ATRNL1Q5VV63 1379 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 SYCE3A1L190 88 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 PLEKHA8P1O95397 391 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 ZBTB48P10074 688 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-221ENST00000567935 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
COMMD4-221ENST00000567935 PKN1Q16512 942 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 RILPL1Q5EBL4 403 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 ADALQ6DHV7 355 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-221ENST00000567935 DIS3L2Q8IYB7 885 aaKnown RBP16.8■□□□□ 0.28
COMMD4-221ENST00000567935 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
COMMD4-221ENST00000567935 V9GY48 417 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-221ENST00000567935 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 SPTLC2O15270 562 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 CTAGE5O15320 804 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 PPP6R2O75170 966 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 SCG2P13521 617 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 CALML3P27482 149 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 GUCY1A2P33402 732 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 GJA5P36382 358 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 ME1P48163 572 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 PFKFB3Q16875 520 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-221ENST00000567935 CFAP100Q494V2 611 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 CCDC73Q6ZRK6 1079 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 GAS2L3Q86XJ1 694 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 OGFOD1Q8N543 542 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 SRBD1Q8N5C6 995 aaKnown RBP16.79■□□□□ 0.28
COMMD4-221ENST00000567935 PTPN18Q99952 460 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 PHF20Q9BVI0 1012 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 NUP62CLQ9H1M0 184 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
COMMD4-221ENST00000567935 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-221ENST00000567935 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-221ENST00000567935 KRT2P35908 639 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 SLC39A14Q15043 492 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 FKBP1CQ5VVH2 108 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 GALNT17Q6IS24 598 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
COMMD4-221ENST00000567935 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 CEP95Q96GE4 821 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
COMMD4-221ENST00000567935 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 A0A1W2PPC1 479 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 TTLL1O95922 423 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 BMP15O95972 392 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.28
COMMD4-221ENST00000567935 XRCC6P12956 609 aaKnown RBP eCLIP16.77■□□□□ 0.28
COMMD4-221ENST00000567935 SHMT1P34896 483 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 CEBPZQ03701 1054 aaKnown RBP16.77■□□□□ 0.28
COMMD4-221ENST00000567935 NFIAQ12857 509 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 CCDC148Q8NFR7 591 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 ANP32BQ92688 251 aaKnown RBP16.77■□□□□ 0.28
COMMD4-221ENST00000567935 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.28
COMMD4-221ENST00000567935 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 MAD2L2Q9UI95 211 aa16.77■□□□□ 0.28
COMMD4-221ENST00000567935 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
COMMD4-221ENST00000567935 hCG_1984214I3L0E3 225 aa16.76■□□□□ 0.27
COMMD4-221ENST00000567935 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
COMMD4-221ENST00000567935 LIG1P18858 919 aa16.76■□□□□ 0.27
COMMD4-221ENST00000567935 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
COMMD4-221ENST00000567935 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
COMMD4-221ENST00000567935 MAP3K11Q16584 847 aa16.76■□□□□ 0.27
COMMD4-221ENST00000567935 ASPRV1Q53RT3 343 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms