RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 PGK1P00558 417 aa22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 SLC3A2P08195 630 aaKnown RBP22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 ZNF865P0CJ78 1059 aaPredicted RBP22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 PDE4BQ07343 736 aa22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 C1orf53Q5VUE5 145 aa22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 MSL3Q8N5Y2 521 aaKnown RBP22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 CEP95Q96GE4 821 aa22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 MTMR4Q9NYA4 1195 aa22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 FEM1BQ9UK73 627 aa22.42■■□□□ 1.18
GTF3C1-207ENST00000567806 ZNFX1Q9P2E3 1918 aaKnown RBP22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 DLL1O00548 723 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 TTLL1O95922 423 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 TLE2Q04725 743 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 BADQ92934 168 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 FSD1Q9BTV5 496 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 FAM184BQ9ULE4 1060 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 SYNPO2Q9UMS6 1093 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 RIPK3Q9Y572 518 aa22.41■■□□□ 1.18
GTF3C1-207ENST00000567806 POTEB2H3BUK9 544 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 ATP2A1O14983 1001 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 TSPY3P0CV98 308 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 TSPY8P0CW00 308 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 FAM109BQ6ICB4 259 aaPredicted RBP22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 NAPBQ9H115 298 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 RAVER2Q9HCJ3 691 aaKnown RBP22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 PDLIM7Q9NR12 457 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 TACC3Q9Y6A5 838 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 PARP14Q460N5 1801 aa22.4■■□□□ 1.18
GTF3C1-207ENST00000567806 SYNGAP1Q96PV0 1343 aa22.39■■□□□ 1.18
GTF3C1-207ENST00000567806 COL11A1P12107 1806 aaPredicted RBP22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 SHHQ15465 462 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 SLFN13Q68D06 897 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 SH3RF1Q7Z6J0 888 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 LRRC47Q8N1G4 583 aaKnown RBP22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 ANKRD35Q8N283 1001 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 GMCL1P1Q8NEA9 526 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 NEDD1Q8NHV4 660 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 SEC62Q99442 399 aaKnown RBP22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 TSEN34Q9BSV6 310 aaKnown RBP22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 SLC38A10Q9HBR0 1119 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 FBXO40Q9UH90 709 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 ISY1Q9ULR0 285 aaKnown RBP22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 PCDHB15Q9Y5E8 787 aa22.39■■□□□ 1.17
GTF3C1-207ENST00000567806 DNAJC25-GNG10A0A024R161 153 aa22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 TRIM43BA6NCK2 446 aa22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 BMP3P12645 472 aa22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 TFAP4Q01664 338 aa22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 MAMDC4Q6UXC1 1216 aa22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 TRIM43Q96BQ3 446 aaPredicted RBP22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 ZHX1Q9UKY1 873 aaPredicted RBP22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 COL6A3P12111 3177 aa22.38■■□□□ 1.17
GTF3C1-207ENST00000567806 A0A1W2PQ45 241 aaPredicted RBP22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 A0A1W2PQY0 241 aa22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 SNAI1O95863 264 aaPredicted RBP22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 FDX1P10109 184 aa22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 ZMYM1Q5SVZ6 1142 aa22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 ZNF467Q7Z7K2 595 aaPredicted RBP22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 CHST13Q8NET6 341 aa22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 PI4K2BQ8TCG2 481 aa22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 NUP133Q8WUM0 1156 aa22.37■■□□□ 1.17
GTF3C1-207ENST00000567806 SMCHD1A6NHR9 2005 aa22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 CLTBP09497 229 aa22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 OAZ1P54368 228 aa22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 PPARAQ07869 468 aa22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 PPP4R3BQ5MIZ7 849 aa22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 OTUD7AQ8TE49 926 aaPredicted RBP22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 CHURC1Q8WUH1 139 aa22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 LENG1Q96BZ8 264 aaPredicted RBP22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 FAM161BQ96MY7 647 aa22.36■■□□□ 1.17
GTF3C1-207ENST00000567806 GREB1LQ9C091 1923 aaPredicted RBP22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 TMEM232C9JQI7 657 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 PQBP1O60828 265 aaKnown RBP22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 ADAMTS4O75173 837 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 MX1P20591 662 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 ACLYP53396 1101 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 IKQ13123 557 aaPredicted RBP22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 C9orf50Q5SZB4 431 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 ZNF697Q5TEC3 545 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 STARD7Q9NQZ5 370 aa22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.35■■□□□ 1.17
GTF3C1-207ENST00000567806 MOXD2PA6NHM9 499 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 DCDC2CA8MYV0 355 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 DUSP11O75319 330 aaKnown RBP22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 RAG1P15918 1043 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 KCNA10Q16322 511 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 FAM160B2Q86V87 743 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 ABHD16BQ9H3Z7 469 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 SPC25Q9HBM1 224 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 TMEM39AQ9NV64 488 aa22.34■■□□□ 1.17
GTF3C1-207ENST00000567806 SYNRGQ9UMZ2 1314 aa22.33■■□□□ 1.17
GTF3C1-207ENST00000567806 SLC1A4P43007 532 aa22.33■■□□□ 1.17
GTF3C1-207ENST00000567806 STAT2P52630 851 aa22.33■■□□□ 1.17
GTF3C1-207ENST00000567806 KLHDC9Q8NEP7 349 aa22.33■■□□□ 1.17
GTF3C1-207ENST00000567806 STAG1Q8WVM7 1258 aa22.33■■□□□ 1.17
GTF3C1-207ENST00000567806 HOMER2Q9NSB8 354 aa22.33■■□□□ 1.17
GTF3C1-207ENST00000567806 PLXNA1Q9UIW2 1896 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 TSPY2A6NKD2 308 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms