RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 HIPK3Q9H422 1215 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 SPC25Q9HBM1 224 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
SMG1-213ENST00000567737 DUSP11O75319 330 aaKnown RBP16.83■□□□□ 0.28
SMG1-213ENST00000567737 ATP2A2P16615 1042 aaKnown RBP16.83■□□□□ 0.28
SMG1-213ENST00000567737 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
SMG1-213ENST00000567737 SEPT2Q15019 361 aa16.83■□□□□ 0.28
SMG1-213ENST00000567737 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
SMG1-213ENST00000567737 KCNH6Q9H252 994 aa16.83■□□□□ 0.28
SMG1-213ENST00000567737 CERS4Q9HA82 394 aa16.83■□□□□ 0.28
SMG1-213ENST00000567737 ZHX1Q9UKY1 873 aaPredicted RBP16.83■□□□□ 0.28
SMG1-213ENST00000567737 A0A1W2PRG0 241 aa16.82■□□□□ 0.28
SMG1-213ENST00000567737 CA3P07451 260 aa16.82■□□□□ 0.28
SMG1-213ENST00000567737 DYNLL1P63167 89 aaKnown RBP16.82■□□□□ 0.28
SMG1-213ENST00000567737 KRT40Q6A162 431 aa16.82■□□□□ 0.28
SMG1-213ENST00000567737 RPUSD2Q8IZ73 545 aaKnown RBP16.82■□□□□ 0.28
SMG1-213ENST00000567737 CD320Q9NPF0 282 aa16.82■□□□□ 0.28
SMG1-213ENST00000567737 MPHOSPH10O00566 681 aaKnown RBP16.81■□□□□ 0.28
SMG1-213ENST00000567737 IGSF3O75054 1194 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 CD4P01730 458 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 PYGBP11216 843 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 SHMT1P34896 483 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 CCL23P55773 120 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 TMEM132BQ14DG7 1078 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 CERS3Q8IU89 383 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 MSL3Q8N5Y2 521 aaKnown RBP16.81■□□□□ 0.28
SMG1-213ENST00000567737 FBXL18Q96ME1 805 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 SNRKQ9NRH2 765 aa16.81■□□□□ 0.28
SMG1-213ENST00000567737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.81■□□□□ 0.28
SMG1-213ENST00000567737 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
SMG1-213ENST00000567737 UMODL1Q5DID0 1318 aa16.8■□□□□ 0.28
SMG1-213ENST00000567737 ALADP13716 330 aa16.8■□□□□ 0.28
SMG1-213ENST00000567737 GNASQ5JWF2 1037 aa16.8■□□□□ 0.28
SMG1-213ENST00000567737 POTEHQ6S545 545 aa16.8■□□□□ 0.28
SMG1-213ENST00000567737 RIOX2Q8IUF8 465 aa16.8■□□□□ 0.28
SMG1-213ENST00000567737 SRGAP3O43295 1099 aa16.79■□□□□ 0.28
SMG1-213ENST00000567737 CYP7A1P22680 504 aa16.79■□□□□ 0.28
SMG1-213ENST00000567737 COPB2P35606 906 aa16.79■□□□□ 0.28
SMG1-213ENST00000567737 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
SMG1-213ENST00000567737 TTC39AQ5SRH9 613 aa16.79■□□□□ 0.28
SMG1-213ENST00000567737 GJD3Q8N144 294 aa16.79■□□□□ 0.28
SMG1-213ENST00000567737 ARNTL2Q8WYA1 636 aa16.79■□□□□ 0.28
SMG1-213ENST00000567737 SSH1Q8WYL5 1049 aa16.79■□□□□ 0.28
SMG1-213ENST00000567737 MYH1P12882 1939 aa16.78■□□□□ 0.28
SMG1-213ENST00000567737 ZNFX1Q9P2E3 1918 aaKnown RBP16.78■□□□□ 0.28
SMG1-213ENST00000567737 EPOPA6NHQ4 379 aa16.78■□□□□ 0.28
SMG1-213ENST00000567737 SNAI1O95863 264 aaPredicted RBP16.78■□□□□ 0.28
SMG1-213ENST00000567737 SSTR3P32745 418 aaPredicted RBP16.78■□□□□ 0.28
SMG1-213ENST00000567737 GJA9P57773 515 aa16.78■□□□□ 0.28
SMG1-213ENST00000567737 KIAA1755Q5JYT7 1200 aa16.78■□□□□ 0.28
SMG1-213ENST00000567737 SPICE1Q8N0Z3 855 aa16.78■□□□□ 0.28
SMG1-213ENST00000567737 MIGA1Q8NAN2 632 aa16.78■□□□□ 0.28
SMG1-213ENST00000567737 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
SMG1-213ENST00000567737 CYP2E1P05181 493 aaPredicted RBP16.77■□□□□ 0.28
SMG1-213ENST00000567737 STAT3P40763 770 aa16.77■□□□□ 0.28
SMG1-213ENST00000567737 CCDC158Q5M9N0 1113 aa16.77■□□□□ 0.28
SMG1-213ENST00000567737 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
SMG1-213ENST00000567737 SH2D4AQ9H788 454 aa16.77■□□□□ 0.28
SMG1-213ENST00000567737 ARHGEF10LQ9HCE6 1279 aa16.77■□□□□ 0.28
SMG1-213ENST00000567737 TRANK1O15050 2925 aa16.76■□□□□ 0.27
SMG1-213ENST00000567737 WDR46O15213 610 aaKnown RBP16.76■□□□□ 0.27
SMG1-213ENST00000567737 POLR3DP05423 398 aaPredicted RBP16.76■□□□□ 0.27
SMG1-213ENST00000567737 PFKMP08237 780 aa16.76■□□□□ 0.27
SMG1-213ENST00000567737 PLCD1P51178 756 aa16.76■□□□□ 0.27
SMG1-213ENST00000567737 ACVR2BQ13705 512 aa16.76■□□□□ 0.27
SMG1-213ENST00000567737 MAMDC4Q6UXC1 1216 aa16.76■□□□□ 0.27
SMG1-213ENST00000567737 FAM178BQ8IXR5 827 aa16.76■□□□□ 0.27
SMG1-213ENST00000567737 NOC4LQ9BVI4 516 aaKnown RBP16.76■□□□□ 0.27
SMG1-213ENST00000567737 HAX1O00165 279 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 TAP1Q03518 808 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 GRB10Q13322 594 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 CCDC144BQ3MJ40 725 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 TMEM179Q6ZVK1 233 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 SLC43A3Q8NBI5 491 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 DDX11Q96FC9 970 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 SLC9A7Q96T83 725 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 VCPKMTQ9H867 229 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 ADAMTS5Q9UNA0 930 aa16.75■□□□□ 0.27
SMG1-213ENST00000567737 KIF28PB7ZC32 967 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 ADCY6O43306 1168 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 CABYRO75952 493 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 ITGA7Q13683 1181 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 TTLL4Q14679 1199 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 SCLYQ96I15 445 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 SEZ6LQ9BYH1 1024 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 ABHD16BQ9H3Z7 469 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 PIH1D3Q9NQM4 214 aaKnown RBP16.74■□□□□ 0.27
SMG1-213ENST00000567737 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.74■□□□□ 0.27
SMG1-213ENST00000567737 TMX2Q9Y320 296 aa16.74■□□□□ 0.27
SMG1-213ENST00000567737 VWA5AO00534 786 aa16.73■□□□□ 0.27
SMG1-213ENST00000567737 ACTN1P12814 892 aa16.73■□□□□ 0.27
SMG1-213ENST00000567737 ZAP70P43403 619 aa16.73■□□□□ 0.27
SMG1-213ENST00000567737 GABPAQ06546 454 aa16.73■□□□□ 0.27
SMG1-213ENST00000567737 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMG1-213ENST00000567737 CXCL17Q6UXB2 119 aa16.73■□□□□ 0.27
SMG1-213ENST00000567737 ZNF467Q7Z7K2 595 aaPredicted RBP16.73■□□□□ 0.27
SMG1-213ENST00000567737 PHOSPHO2Q8TCD6 241 aa16.73■□□□□ 0.27
SMG1-213ENST00000567737 RNF25Q96BH1 459 aaPredicted RBP16.73■□□□□ 0.27
SMG1-213ENST00000567737 MEIS3Q99687 375 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms